[4] | 1 | /* |
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| 2 | * This program is free software; you can redistribute it and/or modify |
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| 3 | * it under the terms of the GNU General Public License as published by |
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| 4 | * the Free Software Foundation; either version 2 of the License, or |
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| 5 | * (at your option) any later version. |
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| 6 | * |
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| 7 | * This program is distributed in the hope that it will be useful, |
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| 8 | * but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 9 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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| 10 | * GNU General Public License for more details. |
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| 11 | * |
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| 12 | * You should have received a copy of the GNU General Public License |
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| 13 | * along with this program; if not, write to the Free Software |
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| 14 | * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. |
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| 15 | */ |
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| 16 | |
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| 17 | /* |
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| 18 | * Clusterer.java |
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| 19 | * Copyright (C) 2004 University of Waikato, Hamilton, New Zealand |
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| 20 | * |
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| 21 | */ |
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| 22 | |
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| 23 | package weka.gui.beans; |
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| 24 | |
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| 25 | import weka.clusterers.EM; |
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| 26 | import weka.core.Instances; |
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| 27 | import weka.core.OptionHandler; |
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| 28 | import weka.core.Utils; |
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| 29 | import weka.filters.Filter; |
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| 30 | import weka.filters.unsupervised.attribute.Remove; |
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| 31 | import weka.gui.Logger; |
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| 32 | import weka.gui.ExtensionFileFilter; |
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| 33 | |
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| 34 | import java.awt.BorderLayout; |
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| 35 | import java.beans.EventSetDescriptor; |
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| 36 | import java.io.*; |
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| 37 | import java.util.Enumeration; |
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| 38 | import java.util.Hashtable; |
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| 39 | import java.util.Vector; |
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| 40 | |
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| 41 | import javax.swing.JPanel; |
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| 42 | import javax.swing.JOptionPane; |
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| 43 | import javax.swing.JFileChooser; |
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| 44 | |
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| 45 | import javax.swing.JPanel; |
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| 46 | |
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| 47 | /** |
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| 48 | * Bean that wraps around weka.clusterers |
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| 49 | * |
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| 50 | * @author <a href="mailto:mutter@cs.waikato.ac.nz">Stefan Mutter</a> |
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| 51 | * @version $Revision: 5247 $ |
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| 52 | * @see JPanel |
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| 53 | * @see BeanCommon |
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| 54 | * @see Visible |
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| 55 | * @see WekaWrapper |
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| 56 | * @see Serializable |
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| 57 | * @see UserRequestAcceptor |
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| 58 | * @see TrainingSetListener |
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| 59 | * @see TestSetListener |
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| 60 | */ |
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| 61 | public class Clusterer |
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| 62 | extends JPanel |
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| 63 | implements BeanCommon, Visible, WekaWrapper, EventConstraints, |
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| 64 | UserRequestAcceptor, TrainingSetListener, |
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| 65 | TestSetListener, ConfigurationProducer { |
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| 66 | |
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| 67 | /** for serialization */ |
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| 68 | private static final long serialVersionUID = 7729795159836843810L; |
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| 69 | |
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| 70 | protected BeanVisual m_visual = |
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| 71 | new BeanVisual("Clusterer", |
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| 72 | BeanVisual.ICON_PATH+"EM.gif", |
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| 73 | BeanVisual.ICON_PATH+"EM_animated.gif"); |
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| 74 | |
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| 75 | private static int IDLE = 0; |
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| 76 | private static int BUILDING_MODEL = 1; |
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| 77 | private static int CLUSTERING = 2; |
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| 78 | |
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| 79 | private int m_state = IDLE; |
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| 80 | |
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| 81 | private Thread m_buildThread = null; |
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| 82 | |
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| 83 | /** |
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| 84 | * Global info for the wrapped classifier (if it exists). |
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| 85 | */ |
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| 86 | protected String m_globalInfo; |
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| 87 | |
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| 88 | /** |
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| 89 | * Objects talking to us |
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| 90 | */ |
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| 91 | private Hashtable m_listenees = new Hashtable(); |
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| 92 | |
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| 93 | /** |
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| 94 | * Objects listening for batch clusterer events |
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| 95 | */ |
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| 96 | private Vector m_batchClustererListeners = new Vector(); |
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| 97 | |
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| 98 | |
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| 99 | /** |
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| 100 | * Objects listening for graph events |
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| 101 | */ |
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| 102 | private Vector m_graphListeners = new Vector(); |
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| 103 | |
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| 104 | /** |
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| 105 | * Objects listening for text events |
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| 106 | */ |
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| 107 | private Vector m_textListeners = new Vector(); |
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| 108 | |
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| 109 | /** |
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| 110 | * Holds training instances for batch training. |
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| 111 | */ |
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| 112 | private Instances m_trainingSet; |
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| 113 | private transient Instances m_testingSet; |
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| 114 | private weka.clusterers.Clusterer m_Clusterer = new EM(); |
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| 115 | |
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| 116 | |
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| 117 | private transient Logger m_log = null; |
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| 118 | |
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| 119 | private Double m_dummy = new Double(0.0); |
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| 120 | |
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| 121 | private transient JFileChooser m_fileChooser = null; |
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| 122 | |
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| 123 | /** |
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| 124 | * Global info (if it exists) for the wrapped classifier |
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| 125 | * |
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| 126 | * @return the global info |
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| 127 | */ |
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| 128 | public String globalInfo() { |
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| 129 | return m_globalInfo; |
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| 130 | } |
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| 131 | |
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| 132 | /** |
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| 133 | * Creates a new <code>Clusterer</code> instance. |
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| 134 | */ |
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| 135 | public Clusterer() { |
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| 136 | setLayout(new BorderLayout()); |
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| 137 | add(m_visual, BorderLayout.CENTER); |
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| 138 | setClusterer(m_Clusterer); |
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| 139 | } |
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| 140 | |
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| 141 | /** |
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| 142 | * Set a custom (descriptive) name for this bean |
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| 143 | * |
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| 144 | * @param name the name to use |
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| 145 | */ |
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| 146 | public void setCustomName(String name) { |
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| 147 | m_visual.setText(name); |
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| 148 | } |
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| 149 | |
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| 150 | /** |
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| 151 | * Get the custom (descriptive) name for this bean (if one has been set) |
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| 152 | * |
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| 153 | * @return the custom name (or the default name) |
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| 154 | */ |
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| 155 | public String getCustomName() { |
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| 156 | return m_visual.getText(); |
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| 157 | } |
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| 158 | |
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| 159 | /** |
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| 160 | * Set the clusterer for this wrapper |
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| 161 | * |
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| 162 | * @param c a <code>weka.clusterers.Clusterer</code> value |
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| 163 | */ |
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| 164 | public void setClusterer(weka.clusterers.Clusterer c) { |
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| 165 | boolean loadImages = true; |
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| 166 | if (c.getClass().getName(). |
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| 167 | compareTo(m_Clusterer.getClass().getName()) == 0) { |
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| 168 | loadImages = false; |
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| 169 | } else { |
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| 170 | // clusterer has changed so any batch training status is now |
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| 171 | // invalid |
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| 172 | m_trainingSet = null; |
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| 173 | } |
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| 174 | m_Clusterer = c; |
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| 175 | String clustererName = c.getClass().toString(); |
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| 176 | clustererName = clustererName.substring(clustererName. |
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| 177 | lastIndexOf('.')+1, |
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| 178 | clustererName.length()); |
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| 179 | if (loadImages) { |
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| 180 | if (!m_visual.loadIcons(BeanVisual.ICON_PATH+clustererName+".gif", |
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| 181 | BeanVisual.ICON_PATH+clustererName+"_animated.gif")) { |
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| 182 | useDefaultVisual(); |
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| 183 | } |
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| 184 | } |
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| 185 | m_visual.setText(clustererName); |
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| 186 | |
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| 187 | // get global info |
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| 188 | m_globalInfo = KnowledgeFlowApp.getGlobalInfo(m_Clusterer); |
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| 189 | } |
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| 190 | |
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| 191 | |
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| 192 | /** |
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| 193 | * Returns true if this clusterer has an incoming connection that is |
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| 194 | * a batch set of instances |
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| 195 | * |
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| 196 | * @return a <code>boolean</code> value |
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| 197 | */ |
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| 198 | public boolean hasIncomingBatchInstances() { |
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| 199 | if (m_listenees.size() == 0) { |
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| 200 | return false; |
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| 201 | } |
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| 202 | if (m_listenees.containsKey("trainingSet") || |
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| 203 | m_listenees.containsKey("testSet") || |
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| 204 | m_listenees.containsKey("dataSet")) { |
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| 205 | return true; |
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| 206 | } |
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| 207 | return false; |
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| 208 | } |
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| 209 | |
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| 210 | /** |
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| 211 | * Get the clusterer currently set for this wrapper |
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| 212 | * |
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| 213 | * @return a <code>weka.clusterers.Clusterer</code> value |
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| 214 | */ |
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| 215 | public weka.clusterers.Clusterer getClusterer() { |
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| 216 | return m_Clusterer; |
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| 217 | } |
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| 218 | |
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| 219 | /** |
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| 220 | * Sets the algorithm (clusterer) for this bean |
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| 221 | * |
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| 222 | * @param algorithm an <code>Object</code> value |
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| 223 | * @exception IllegalArgumentException if an error occurs |
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| 224 | */ |
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| 225 | public void setWrappedAlgorithm(Object algorithm) |
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| 226 | { |
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| 227 | |
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| 228 | if (!(algorithm instanceof weka.clusterers.Clusterer)) { |
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| 229 | throw new IllegalArgumentException(algorithm.getClass()+" : incorrect " |
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| 230 | +"type of algorithm (Clusterer)"); |
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| 231 | } |
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| 232 | setClusterer((weka.clusterers.Clusterer)algorithm); |
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| 233 | } |
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| 234 | |
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| 235 | /** |
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| 236 | * Returns the wrapped clusterer |
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| 237 | * |
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| 238 | * @return an <code>Object</code> value |
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| 239 | */ |
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| 240 | public Object getWrappedAlgorithm() { |
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| 241 | return getClusterer(); |
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| 242 | } |
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| 243 | |
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| 244 | |
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| 245 | /** |
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| 246 | * Accepts a training set and builds batch clusterer |
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| 247 | * |
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| 248 | * @param e a <code>TrainingSetEvent</code> value |
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| 249 | */ |
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| 250 | public void acceptTrainingSet(final TrainingSetEvent e) { |
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| 251 | if (e.isStructureOnly()) { |
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| 252 | // no need to build a clusterer, instead just generate a dummy |
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| 253 | // BatchClustererEvent in order to pass on instance structure to |
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| 254 | // any listeners |
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| 255 | BatchClustererEvent ce = |
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| 256 | new BatchClustererEvent(this, m_Clusterer, |
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| 257 | new DataSetEvent(this, e.getTrainingSet()), |
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| 258 | e.getSetNumber(), e.getMaxSetNumber(),1); |
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| 259 | |
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| 260 | notifyBatchClustererListeners(ce); |
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| 261 | return; |
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| 262 | } |
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| 263 | if (m_buildThread == null) { |
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| 264 | try { |
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| 265 | if (m_state == IDLE) { |
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| 266 | synchronized (this) { |
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| 267 | m_state = BUILDING_MODEL; |
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| 268 | } |
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| 269 | m_trainingSet = e.getTrainingSet(); |
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| 270 | // final String oldText = m_visual.getText(); |
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| 271 | m_buildThread = new Thread() { |
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| 272 | public void run() { |
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| 273 | try { |
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| 274 | if (m_trainingSet != null) { |
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| 275 | m_visual.setAnimated(); |
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| 276 | // m_visual.setText("Building clusters..."); |
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| 277 | if (m_log != null) { |
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| 278 | m_log.statusMessage(statusMessagePrefix() |
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| 279 | + "Building clusters..."); |
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| 280 | } |
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| 281 | buildClusterer(); |
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| 282 | if(m_batchClustererListeners.size() > 0){ |
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| 283 | BatchClustererEvent ce = |
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| 284 | new BatchClustererEvent(this, m_Clusterer, |
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| 285 | new DataSetEvent(this, e.getTrainingSet()), |
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| 286 | e.getSetNumber(), e.getMaxSetNumber(),1); |
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| 287 | notifyBatchClustererListeners(ce); |
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| 288 | } |
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| 289 | if (m_Clusterer instanceof weka.core.Drawable && |
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| 290 | m_graphListeners.size() > 0) { |
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| 291 | String grphString = |
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| 292 | ((weka.core.Drawable)m_Clusterer).graph(); |
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| 293 | int grphType = ((weka.core.Drawable)m_Clusterer).graphType(); |
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| 294 | String grphTitle = m_Clusterer.getClass().getName(); |
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| 295 | grphTitle = grphTitle.substring(grphTitle. |
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| 296 | lastIndexOf('.')+1, |
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| 297 | grphTitle.length()); |
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| 298 | grphTitle = "Set " + e.getSetNumber() + " (" |
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| 299 | +e.getTrainingSet().relationName() + ") " |
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| 300 | +grphTitle; |
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| 301 | |
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| 302 | GraphEvent ge = new GraphEvent(Clusterer.this, |
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| 303 | grphString, |
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| 304 | grphTitle, |
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| 305 | grphType); |
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| 306 | notifyGraphListeners(ge); |
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| 307 | } |
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| 308 | |
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| 309 | if (m_textListeners.size() > 0) { |
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| 310 | String modelString = m_Clusterer.toString(); |
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| 311 | String titleString = m_Clusterer.getClass().getName(); |
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| 312 | |
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| 313 | titleString = titleString. |
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| 314 | substring(titleString.lastIndexOf('.') + 1, |
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| 315 | titleString.length()); |
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| 316 | modelString = "=== Clusterer model ===\n\n" + |
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| 317 | "Scheme: " +titleString+"\n" + |
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| 318 | "Relation: " + m_trainingSet.relationName() + |
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| 319 | ((e.getMaxSetNumber() > 1) |
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| 320 | ? "\nTraining Fold: "+e.getSetNumber() |
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| 321 | :"") |
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| 322 | + "\n\n" |
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| 323 | + modelString; |
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| 324 | titleString = "Model: " + titleString; |
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| 325 | |
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| 326 | TextEvent nt = new TextEvent(Clusterer.this, |
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| 327 | modelString, |
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| 328 | titleString); |
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| 329 | notifyTextListeners(nt); |
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| 330 | } |
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| 331 | } |
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| 332 | } catch (Exception ex) { |
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| 333 | Clusterer.this.stop(); // stop processing |
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| 334 | if (m_log != null) { |
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| 335 | m_log.statusMessage(statusMessagePrefix() |
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| 336 | + "ERROR (See log for details"); |
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| 337 | m_log.logMessage("[Clusterer] " + statusMessagePrefix() |
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| 338 | + " problem training clusterer. " + ex.getMessage()); |
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| 339 | } |
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| 340 | ex.printStackTrace(); |
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| 341 | } finally { |
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| 342 | // m_visual.setText(oldText); |
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| 343 | m_visual.setStatic(); |
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| 344 | m_state = IDLE; |
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| 345 | if (isInterrupted()) { |
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| 346 | // prevent any clusterer events from being fired |
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| 347 | m_trainingSet = null; |
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| 348 | if (m_log != null) { |
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| 349 | m_log.logMessage("[Clusterer]" + statusMessagePrefix() |
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| 350 | + " Build clusterer interrupted!"); |
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| 351 | m_log.statusMessage(statusMessagePrefix() |
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| 352 | + "INTERRUPTED"); |
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| 353 | } |
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| 354 | } else { |
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| 355 | // save header |
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| 356 | m_trainingSet = new Instances(m_trainingSet, 0); |
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| 357 | if (m_log != null) { |
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| 358 | m_log.statusMessage(statusMessagePrefix() + "Finished."); |
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| 359 | } |
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| 360 | } |
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| 361 | block(false); |
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| 362 | } |
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| 363 | } |
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| 364 | }; |
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| 365 | m_buildThread.setPriority(Thread.MIN_PRIORITY); |
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| 366 | m_buildThread.start(); |
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| 367 | // make sure the thread is still running before we block |
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| 368 | // if (m_buildThread.isAlive()) { |
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| 369 | block(true); |
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| 370 | // } |
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| 371 | m_buildThread = null; |
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| 372 | m_state = IDLE; |
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| 373 | } |
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| 374 | } catch (Exception ex) { |
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| 375 | ex.printStackTrace(); |
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| 376 | } |
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| 377 | } |
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| 378 | } |
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| 379 | |
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| 380 | /** |
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| 381 | * Accepts a test set for a batch trained clusterer |
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| 382 | * |
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| 383 | * @param e a <code>TestSetEvent</code> value |
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| 384 | */ |
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| 385 | public void acceptTestSet(TestSetEvent e) { |
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| 386 | |
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| 387 | if (m_trainingSet != null) { |
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| 388 | try { |
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| 389 | if (m_state == IDLE) { |
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| 390 | synchronized(this) { |
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| 391 | m_state = CLUSTERING; |
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| 392 | } |
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| 393 | m_testingSet = e.getTestSet(); |
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| 394 | if (m_trainingSet.equalHeaders(m_testingSet)) { |
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| 395 | BatchClustererEvent ce = |
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| 396 | new BatchClustererEvent(this, m_Clusterer, |
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| 397 | new DataSetEvent(this, e.getTestSet()), |
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| 398 | e.getSetNumber(), e.getMaxSetNumber(),0); |
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| 399 | |
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| 400 | notifyBatchClustererListeners(ce); |
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| 401 | |
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| 402 | } |
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| 403 | m_state = IDLE; |
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| 404 | } |
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| 405 | } catch (Exception ex) { |
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| 406 | stop(); // stop any processing |
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| 407 | if (m_log != null) { |
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| 408 | m_log.statusMessage(statusMessagePrefix() |
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| 409 | + "ERROR (see log for details"); |
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| 410 | m_log.logMessage("[Clusterer] " + statusMessagePrefix() |
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| 411 | + " problem during testing. " + ex.getMessage()); |
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| 412 | } |
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| 413 | ex.printStackTrace(); |
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| 414 | } |
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| 415 | } |
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| 416 | } |
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| 417 | |
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| 418 | /** |
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| 419 | * Builds the clusters |
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| 420 | */ |
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| 421 | private void buildClusterer() throws Exception { |
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| 422 | if(m_trainingSet.classIndex() < 0) |
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| 423 | m_Clusterer.buildClusterer(m_trainingSet); |
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| 424 | else{ //class based evaluation if class attribute is set |
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| 425 | Remove removeClass = new Remove(); |
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| 426 | removeClass.setAttributeIndices(""+(m_trainingSet.classIndex()+1)); |
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| 427 | removeClass.setInvertSelection(false); |
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| 428 | removeClass.setInputFormat(m_trainingSet); |
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| 429 | Instances clusterTrain = Filter.useFilter(m_trainingSet, removeClass); |
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| 430 | m_Clusterer.buildClusterer(clusterTrain); |
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| 431 | } |
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| 432 | } |
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| 433 | |
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| 434 | /** |
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| 435 | * Sets the visual appearance of this wrapper bean |
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| 436 | * |
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| 437 | * @param newVisual a <code>BeanVisual</code> value |
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| 438 | */ |
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| 439 | public void setVisual(BeanVisual newVisual) { |
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| 440 | m_visual = newVisual; |
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| 441 | } |
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| 442 | |
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| 443 | /** |
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| 444 | * Gets the visual appearance of this wrapper bean |
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| 445 | */ |
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| 446 | public BeanVisual getVisual() { |
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| 447 | return m_visual; |
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| 448 | } |
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| 449 | |
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| 450 | /** |
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| 451 | * Use the default visual appearance for this bean |
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| 452 | */ |
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| 453 | public void useDefaultVisual() { |
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| 454 | m_visual.loadIcons(BeanVisual.ICON_PATH+"DefaultClusterer.gif", |
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| 455 | BeanVisual.ICON_PATH+"DefaultClusterer_animated.gif"); |
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| 456 | } |
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| 457 | |
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| 458 | /** |
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| 459 | * Add a batch clusterer listener |
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| 460 | * |
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| 461 | * @param cl a <code>BatchClustererListener</code> value |
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| 462 | */ |
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| 463 | public synchronized void |
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| 464 | addBatchClustererListener(BatchClustererListener cl) { |
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| 465 | m_batchClustererListeners.addElement(cl); |
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| 466 | } |
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| 467 | |
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| 468 | /** |
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| 469 | * Remove a batch clusterer listener |
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| 470 | * |
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| 471 | * @param cl a <code>BatchClustererListener</code> value |
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| 472 | */ |
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| 473 | public synchronized void |
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| 474 | removeBatchClustererListener(BatchClustererListener cl) { |
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| 475 | m_batchClustererListeners.remove(cl); |
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| 476 | } |
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| 477 | |
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| 478 | /** |
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| 479 | * Notify all batch clusterer listeners of a batch clusterer event |
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| 480 | * |
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| 481 | * @param ce a <code>BatchClustererEvent</code> value |
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| 482 | */ |
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| 483 | private void notifyBatchClustererListeners(BatchClustererEvent ce) { |
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| 484 | Vector l; |
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| 485 | synchronized (this) { |
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| 486 | l = (Vector)m_batchClustererListeners.clone(); |
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| 487 | } |
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| 488 | if (l.size() > 0) { |
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| 489 | for(int i = 0; i < l.size(); i++) { |
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| 490 | ((BatchClustererListener)l.elementAt(i)).acceptClusterer(ce); |
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| 491 | } |
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| 492 | } |
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| 493 | } |
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| 494 | |
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| 495 | /** |
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| 496 | * Add a graph listener |
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| 497 | * |
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| 498 | * @param cl a <code>GraphListener</code> value |
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| 499 | */ |
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| 500 | public synchronized void addGraphListener(GraphListener cl) { |
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| 501 | m_graphListeners.addElement(cl); |
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| 502 | } |
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| 503 | |
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| 504 | /** |
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| 505 | * Remove a graph listener |
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| 506 | * |
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| 507 | * @param cl a <code>GraphListener</code> value |
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| 508 | */ |
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| 509 | public synchronized void removeGraphListener(GraphListener cl) { |
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| 510 | m_graphListeners.remove(cl); |
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| 511 | } |
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| 512 | |
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| 513 | /** |
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| 514 | * Notify all graph listeners of a graph event |
---|
| 515 | * |
---|
| 516 | * @param ge a <code>GraphEvent</code> value |
---|
| 517 | */ |
---|
| 518 | private void notifyGraphListeners(GraphEvent ge) { |
---|
| 519 | Vector l; |
---|
| 520 | synchronized (this) { |
---|
| 521 | l = (Vector)m_graphListeners.clone(); |
---|
| 522 | } |
---|
| 523 | if (l.size() > 0) { |
---|
| 524 | for(int i = 0; i < l.size(); i++) { |
---|
| 525 | ((GraphListener)l.elementAt(i)).acceptGraph(ge); |
---|
| 526 | } |
---|
| 527 | } |
---|
| 528 | } |
---|
| 529 | |
---|
| 530 | /** |
---|
| 531 | * Add a text listener |
---|
| 532 | * |
---|
| 533 | * @param cl a <code>TextListener</code> value |
---|
| 534 | */ |
---|
| 535 | public synchronized void addTextListener(TextListener cl) { |
---|
| 536 | m_textListeners.addElement(cl); |
---|
| 537 | } |
---|
| 538 | |
---|
| 539 | /** |
---|
| 540 | * Remove a text listener |
---|
| 541 | * |
---|
| 542 | * @param cl a <code>TextListener</code> value |
---|
| 543 | */ |
---|
| 544 | public synchronized void removeTextListener(TextListener cl) { |
---|
| 545 | m_textListeners.remove(cl); |
---|
| 546 | } |
---|
| 547 | |
---|
| 548 | /** |
---|
| 549 | * Notify all text listeners of a text event |
---|
| 550 | * |
---|
| 551 | * @param ge a <code>TextEvent</code> value |
---|
| 552 | */ |
---|
| 553 | private void notifyTextListeners(TextEvent ge) { |
---|
| 554 | Vector l; |
---|
| 555 | synchronized (this) { |
---|
| 556 | l = (Vector)m_textListeners.clone(); |
---|
| 557 | } |
---|
| 558 | if (l.size() > 0) { |
---|
| 559 | for(int i = 0; i < l.size(); i++) { |
---|
| 560 | ((TextListener)l.elementAt(i)).acceptText(ge); |
---|
| 561 | } |
---|
| 562 | } |
---|
| 563 | } |
---|
| 564 | |
---|
| 565 | /** |
---|
| 566 | * We don't have to keep track of configuration listeners (see the |
---|
| 567 | * documentation for ConfigurationListener/ConfigurationEvent). |
---|
| 568 | * |
---|
| 569 | * @param cl a ConfigurationListener. |
---|
| 570 | */ |
---|
| 571 | public synchronized void addConfigurationListener(ConfigurationListener cl) { |
---|
| 572 | |
---|
| 573 | } |
---|
| 574 | |
---|
| 575 | /** |
---|
| 576 | * We don't have to keep track of configuration listeners (see the |
---|
| 577 | * documentation for ConfigurationListener/ConfigurationEvent). |
---|
| 578 | * |
---|
| 579 | * @param cl a ConfigurationListener. |
---|
| 580 | */ |
---|
| 581 | public synchronized void removeConfigurationListener(ConfigurationListener cl) { |
---|
| 582 | |
---|
| 583 | } |
---|
| 584 | |
---|
| 585 | |
---|
| 586 | /** |
---|
| 587 | * Returns true if, at this time, |
---|
| 588 | * the object will accept a connection with respect to the named event |
---|
| 589 | * |
---|
| 590 | * @param eventName the event |
---|
| 591 | * @return true if the object will accept a connection |
---|
| 592 | */ |
---|
| 593 | public boolean connectionAllowed(String eventName) { |
---|
| 594 | /* if (eventName.compareTo("instance") == 0) { |
---|
| 595 | if (!(m_Clusterer instanceof weka.classifiers.UpdateableClassifier)) { |
---|
| 596 | return false; |
---|
| 597 | } |
---|
| 598 | } */ |
---|
| 599 | if (m_listenees.containsKey(eventName)) { |
---|
| 600 | return false; |
---|
| 601 | } |
---|
| 602 | return true; |
---|
| 603 | } |
---|
| 604 | |
---|
| 605 | /** |
---|
| 606 | * Returns true if, at this time, |
---|
| 607 | * the object will accept a connection according to the supplied |
---|
| 608 | * EventSetDescriptor |
---|
| 609 | * |
---|
| 610 | * @param esd the EventSetDescriptor |
---|
| 611 | * @return true if the object will accept a connection |
---|
| 612 | */ |
---|
| 613 | public boolean connectionAllowed(EventSetDescriptor esd) { |
---|
| 614 | return connectionAllowed(esd.getName()); |
---|
| 615 | } |
---|
| 616 | |
---|
| 617 | /** |
---|
| 618 | * Notify this object that it has been registered as a listener with |
---|
| 619 | * a source with respect to the named event |
---|
| 620 | * |
---|
| 621 | * @param eventName the event |
---|
| 622 | * @param source the source with which this object has been registered as |
---|
| 623 | * a listener |
---|
| 624 | */ |
---|
| 625 | public synchronized void connectionNotification(String eventName, |
---|
| 626 | Object source) { |
---|
| 627 | |
---|
| 628 | if (connectionAllowed(eventName)) { |
---|
| 629 | m_listenees.put(eventName, source); |
---|
| 630 | /* if (eventName.compareTo("instance") == 0) { |
---|
| 631 | startIncrementalHandler(); |
---|
| 632 | } */ |
---|
| 633 | } |
---|
| 634 | } |
---|
| 635 | |
---|
| 636 | /** |
---|
| 637 | * Notify this object that it has been deregistered as a listener with |
---|
| 638 | * a source with respect to the supplied event name |
---|
| 639 | * |
---|
| 640 | * @param eventName the event |
---|
| 641 | * @param source the source with which this object has been registered as |
---|
| 642 | * a listener |
---|
| 643 | */ |
---|
| 644 | public synchronized void disconnectionNotification(String eventName, |
---|
| 645 | Object source) { |
---|
| 646 | m_listenees.remove(eventName); |
---|
| 647 | } |
---|
| 648 | |
---|
| 649 | /** |
---|
| 650 | * Function used to stop code that calls acceptTrainingSet. This is |
---|
| 651 | * needed as clusterer construction is performed inside a separate |
---|
| 652 | * thread of execution. |
---|
| 653 | * |
---|
| 654 | * @param tf a <code>boolean</code> value |
---|
| 655 | */ |
---|
| 656 | private synchronized void block(boolean tf) { |
---|
| 657 | |
---|
| 658 | if (tf) { |
---|
| 659 | try { |
---|
| 660 | // only block if thread is still doing something useful! |
---|
| 661 | if (m_buildThread.isAlive() && m_state != IDLE) { |
---|
| 662 | wait(); |
---|
| 663 | } |
---|
| 664 | } catch (InterruptedException ex) { |
---|
| 665 | } |
---|
| 666 | } else { |
---|
| 667 | notifyAll(); |
---|
| 668 | } |
---|
| 669 | } |
---|
| 670 | |
---|
| 671 | /** |
---|
| 672 | * Returns true if. at this time, the bean is busy with some |
---|
| 673 | * (i.e. perhaps a worker thread is performing some calculation). |
---|
| 674 | * |
---|
| 675 | * @return true if the bean is busy. |
---|
| 676 | */ |
---|
| 677 | public boolean isBusy() { |
---|
| 678 | return (m_buildThread != null); |
---|
| 679 | } |
---|
| 680 | |
---|
| 681 | /** |
---|
| 682 | * Stop any clusterer action |
---|
| 683 | */ |
---|
| 684 | public void stop() { |
---|
| 685 | // tell all listenees (upstream beans) to stop |
---|
| 686 | Enumeration en = m_listenees.keys(); |
---|
| 687 | while (en.hasMoreElements()) { |
---|
| 688 | Object tempO = m_listenees.get(en.nextElement()); |
---|
| 689 | if (tempO instanceof BeanCommon) { |
---|
| 690 | ((BeanCommon)tempO).stop(); |
---|
| 691 | } |
---|
| 692 | } |
---|
| 693 | |
---|
| 694 | // stop the build thread |
---|
| 695 | if (m_buildThread != null) { |
---|
| 696 | m_buildThread.interrupt(); |
---|
| 697 | m_buildThread.stop(); |
---|
| 698 | m_buildThread = null; |
---|
| 699 | m_visual.setStatic(); |
---|
| 700 | } |
---|
| 701 | } |
---|
| 702 | |
---|
| 703 | /** |
---|
| 704 | * Set a logger |
---|
| 705 | * |
---|
| 706 | * @param logger a <code>Logger</code> value |
---|
| 707 | */ |
---|
| 708 | public void setLog(Logger logger) { |
---|
| 709 | m_log = logger; |
---|
| 710 | } |
---|
| 711 | |
---|
| 712 | public void saveModel() { |
---|
| 713 | try { |
---|
| 714 | if (m_fileChooser == null) { |
---|
| 715 | // i.e. after de-serialization |
---|
| 716 | m_fileChooser = |
---|
| 717 | new JFileChooser(new File(System.getProperty("user.dir"))); |
---|
| 718 | ExtensionFileFilter ef = new ExtensionFileFilter("model", "Serialized weka clusterer"); |
---|
| 719 | m_fileChooser.setFileFilter(ef); |
---|
| 720 | } |
---|
| 721 | int returnVal = m_fileChooser.showSaveDialog(this); |
---|
| 722 | if (returnVal == JFileChooser.APPROVE_OPTION) { |
---|
| 723 | File saveTo = m_fileChooser.getSelectedFile(); |
---|
| 724 | String fn = saveTo.getAbsolutePath(); |
---|
| 725 | if (!fn.endsWith(".model")) { |
---|
| 726 | fn += ".model"; |
---|
| 727 | saveTo = new File(fn); |
---|
| 728 | } |
---|
| 729 | ObjectOutputStream os = |
---|
| 730 | new ObjectOutputStream(new BufferedOutputStream( |
---|
| 731 | new FileOutputStream(saveTo))); |
---|
| 732 | os.writeObject(m_Clusterer); |
---|
| 733 | if (m_trainingSet != null) { |
---|
| 734 | Instances header = new Instances(m_trainingSet, 0); |
---|
| 735 | os.writeObject(header); |
---|
| 736 | } |
---|
| 737 | os.close(); |
---|
| 738 | if (m_log != null) { |
---|
| 739 | m_log.logMessage("[Clusterer] Saved clusterer " + getCustomName()); |
---|
| 740 | } |
---|
| 741 | } |
---|
| 742 | } catch (Exception ex) { |
---|
| 743 | JOptionPane.showMessageDialog(Clusterer.this, |
---|
| 744 | "Problem saving clusterer.\n", |
---|
| 745 | "Save Model", |
---|
| 746 | JOptionPane.ERROR_MESSAGE); |
---|
| 747 | if (m_log != null) { |
---|
| 748 | m_log.logMessage("[Clusterer] Problem saving clusterer. " |
---|
| 749 | + getCustomName() + ex.getMessage()); |
---|
| 750 | } |
---|
| 751 | } |
---|
| 752 | } |
---|
| 753 | |
---|
| 754 | public void loadModel() { |
---|
| 755 | try { |
---|
| 756 | if (m_fileChooser == null) { |
---|
| 757 | // i.e. after de-serialization |
---|
| 758 | m_fileChooser = |
---|
| 759 | new JFileChooser(new File(System.getProperty("user.dir"))); |
---|
| 760 | ExtensionFileFilter ef = new ExtensionFileFilter("model", "Serialized weka clusterer"); |
---|
| 761 | m_fileChooser.setFileFilter(ef); |
---|
| 762 | } |
---|
| 763 | int returnVal = m_fileChooser.showOpenDialog(this); |
---|
| 764 | if (returnVal == JFileChooser.APPROVE_OPTION) { |
---|
| 765 | File loadFrom = m_fileChooser.getSelectedFile(); |
---|
| 766 | ObjectInputStream is = |
---|
| 767 | new ObjectInputStream(new BufferedInputStream( |
---|
| 768 | new FileInputStream(loadFrom))); |
---|
| 769 | // try and read the model |
---|
| 770 | weka.clusterers.Clusterer temp = (weka.clusterers.Clusterer)is.readObject(); |
---|
| 771 | |
---|
| 772 | // Update name and icon |
---|
| 773 | setClusterer(temp); |
---|
| 774 | |
---|
| 775 | // try and read the header (if present) |
---|
| 776 | try { |
---|
| 777 | m_trainingSet = (Instances)is.readObject(); |
---|
| 778 | } catch (Exception ex) { |
---|
| 779 | // quietly ignore |
---|
| 780 | } |
---|
| 781 | is.close(); |
---|
| 782 | if (m_log != null) { |
---|
| 783 | m_log.logMessage("[Clusterer] Loaded clusterer: " |
---|
| 784 | + m_Clusterer.getClass().toString()); |
---|
| 785 | } |
---|
| 786 | } |
---|
| 787 | } catch (Exception ex) { |
---|
| 788 | JOptionPane.showMessageDialog(Clusterer.this, |
---|
| 789 | "Problem loading classifier.\n", |
---|
| 790 | "Load Model", |
---|
| 791 | JOptionPane.ERROR_MESSAGE); |
---|
| 792 | if (m_log != null) { |
---|
| 793 | m_log.logMessage("[Clusterer] Problem loading classifier. " |
---|
| 794 | + ex.getMessage()); |
---|
| 795 | } |
---|
| 796 | } |
---|
| 797 | } |
---|
| 798 | |
---|
| 799 | /** |
---|
| 800 | * Return an enumeration of requests that can be made by the user |
---|
| 801 | * |
---|
| 802 | * @return an <code>Enumeration</code> value |
---|
| 803 | */ |
---|
| 804 | public Enumeration enumerateRequests() { |
---|
| 805 | Vector newVector = new Vector(0); |
---|
| 806 | if (m_buildThread != null) { |
---|
| 807 | newVector.addElement("Stop"); |
---|
| 808 | } |
---|
| 809 | |
---|
| 810 | if (m_buildThread == null && |
---|
| 811 | m_Clusterer != null) { |
---|
| 812 | newVector.addElement("Save model"); |
---|
| 813 | } |
---|
| 814 | |
---|
| 815 | if (m_buildThread == null) { |
---|
| 816 | newVector.addElement("Load model"); |
---|
| 817 | } |
---|
| 818 | |
---|
| 819 | return newVector.elements(); |
---|
| 820 | } |
---|
| 821 | |
---|
| 822 | /** |
---|
| 823 | * Perform a particular request |
---|
| 824 | * |
---|
| 825 | * @param request the request to perform |
---|
| 826 | * @exception IllegalArgumentException if an error occurs |
---|
| 827 | */ |
---|
| 828 | public void performRequest(String request) { |
---|
| 829 | if (request.compareTo("Stop") == 0) { |
---|
| 830 | stop(); |
---|
| 831 | } else if (request.compareTo("Save model") == 0) { |
---|
| 832 | saveModel(); |
---|
| 833 | } else if (request.compareTo("Load model") == 0) { |
---|
| 834 | loadModel(); |
---|
| 835 | } else { |
---|
| 836 | throw new IllegalArgumentException(request |
---|
| 837 | + " not supported (Clusterer)"); |
---|
| 838 | } |
---|
| 839 | } |
---|
| 840 | |
---|
| 841 | /** |
---|
| 842 | * Returns true, if at the current time, the event described by the |
---|
| 843 | * supplied event descriptor could be generated. |
---|
| 844 | * |
---|
| 845 | * @param esd an <code>EventSetDescriptor</code> value |
---|
| 846 | * @return a <code>boolean</code> value |
---|
| 847 | */ |
---|
| 848 | public boolean eventGeneratable(EventSetDescriptor esd) { |
---|
| 849 | String eventName = esd.getName(); |
---|
| 850 | return eventGeneratable(eventName); |
---|
| 851 | } |
---|
| 852 | |
---|
| 853 | /** |
---|
| 854 | * Returns true, if at the current time, the named event could |
---|
| 855 | * be generated. Assumes that the supplied event name is |
---|
| 856 | * an event that could be generated by this bean |
---|
| 857 | * |
---|
| 858 | * @param eventName the name of the event in question |
---|
| 859 | * @return true if the named event could be generated at this point in |
---|
| 860 | * time |
---|
| 861 | */ |
---|
| 862 | public boolean eventGeneratable(String eventName) { |
---|
| 863 | if (eventName.compareTo("graph") == 0) { |
---|
| 864 | // can't generate a GraphEvent if clusterer is not drawable |
---|
| 865 | if (!(m_Clusterer instanceof weka.core.Drawable)) { |
---|
| 866 | return false; |
---|
| 867 | } |
---|
| 868 | // need to have a training set before the clusterer |
---|
| 869 | // can generate a graph! |
---|
| 870 | if (!m_listenees.containsKey("trainingSet")) { |
---|
| 871 | return false; |
---|
| 872 | } |
---|
| 873 | // Source needs to be able to generate a trainingSet |
---|
| 874 | // before we can generate a graph |
---|
| 875 | Object source = m_listenees.get("trainingSet"); |
---|
| 876 | if (source instanceof EventConstraints) { |
---|
| 877 | if (!((EventConstraints)source).eventGeneratable("trainingSet")) { |
---|
| 878 | return false; |
---|
| 879 | } |
---|
| 880 | } |
---|
| 881 | } |
---|
| 882 | |
---|
| 883 | if (eventName.compareTo("batchClusterer") == 0) { |
---|
| 884 | if (!m_listenees.containsKey("trainingSet")) { |
---|
| 885 | return false; |
---|
| 886 | } |
---|
| 887 | |
---|
| 888 | Object source = m_listenees.get("trainingSet"); |
---|
| 889 | if (source != null && source instanceof EventConstraints) { |
---|
| 890 | if (!((EventConstraints)source).eventGeneratable("trainingSet")) { |
---|
| 891 | return false; |
---|
| 892 | } |
---|
| 893 | } |
---|
| 894 | } |
---|
| 895 | |
---|
| 896 | if (eventName.compareTo("text") == 0) { |
---|
| 897 | if (!m_listenees.containsKey("trainingSet")){ |
---|
| 898 | return false; |
---|
| 899 | } |
---|
| 900 | Object source = m_listenees.get("trainingSet"); |
---|
| 901 | if (source != null && source instanceof EventConstraints) { |
---|
| 902 | if (!((EventConstraints)source).eventGeneratable("trainingSet")) { |
---|
| 903 | return false; |
---|
| 904 | } |
---|
| 905 | } |
---|
| 906 | } |
---|
| 907 | |
---|
| 908 | if (eventName.compareTo("batchClassifier") == 0) |
---|
| 909 | return false; |
---|
| 910 | if (eventName.compareTo("incrementalClassifier") == 0) |
---|
| 911 | return false; |
---|
| 912 | |
---|
| 913 | return true; |
---|
| 914 | } |
---|
| 915 | |
---|
| 916 | private String statusMessagePrefix() { |
---|
| 917 | return getCustomName() + "$" + hashCode() + "|" |
---|
| 918 | + ((m_Clusterer instanceof OptionHandler && |
---|
| 919 | Utils.joinOptions(((OptionHandler)m_Clusterer).getOptions()).length() > 0) |
---|
| 920 | ? Utils.joinOptions(((OptionHandler)m_Clusterer).getOptions()) + "|" |
---|
| 921 | : ""); |
---|
| 922 | } |
---|
| 923 | } |
---|