1 | /* |
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2 | * This program is free software; you can redistribute it and/or modify |
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3 | * it under the terms of the GNU General Public License as published by |
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4 | * the Free Software Foundation; either version 2 of the License, or |
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5 | * (at your option) any later version. |
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6 | * |
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7 | * This program is distributed in the hope that it will be useful, |
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8 | * but WITHOUT ANY WARRANTY; without even the implied warranty of |
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9 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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10 | * GNU General Public License for more details. |
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11 | * |
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12 | * You should have received a copy of the GNU General Public License |
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13 | * along with this program; if not, write to the Free Software |
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14 | * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. |
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15 | */ |
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16 | |
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17 | /* |
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18 | * SingleClustererEnhancer.java |
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19 | * Copyright (C) 2006 University of Waikato, Hamilton, New Zealand |
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20 | * |
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21 | */ |
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22 | |
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23 | package weka.clusterers; |
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24 | |
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25 | import weka.core.Capabilities; |
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26 | import weka.core.Option; |
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27 | import weka.core.OptionHandler; |
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28 | import weka.core.Utils; |
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29 | import weka.core.Capabilities.Capability; |
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30 | |
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31 | import java.util.Enumeration; |
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32 | import java.util.Vector; |
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33 | |
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34 | /** |
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35 | * Meta-clusterer for enhancing a base clusterer. |
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36 | * |
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37 | * @author FracPete (fracpete at waikato dot ac dot nz) |
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38 | * @version $Revision: 1.4 $ |
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39 | */ |
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40 | public abstract class SingleClustererEnhancer |
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41 | extends AbstractClusterer |
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42 | implements OptionHandler { |
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43 | |
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44 | /** for serialization */ |
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45 | private static final long serialVersionUID = 4893928362926428671L; |
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46 | |
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47 | /** the clusterer */ |
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48 | protected Clusterer m_Clusterer = new SimpleKMeans(); |
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49 | |
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50 | /** |
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51 | * String describing default clusterer. |
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52 | * |
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53 | * @return the default clusterer classname |
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54 | */ |
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55 | protected String defaultClustererString() { |
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56 | return SimpleKMeans.class.getName(); |
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57 | } |
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58 | |
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59 | /** |
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60 | * Returns an enumeration describing the available options. |
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61 | * |
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62 | * @return an enumeration of all the available options. |
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63 | */ |
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64 | public Enumeration listOptions() { |
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65 | Vector result = new Vector(); |
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66 | |
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67 | result.addElement(new Option( |
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68 | "\tFull name of base clusterer.\n" |
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69 | + "\t(default: " + defaultClustererString() +")", |
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70 | "W", 1, "-W")); |
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71 | |
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72 | if (m_Clusterer instanceof OptionHandler) { |
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73 | result.addElement(new Option( |
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74 | "", |
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75 | "", 0, "\nOptions specific to clusterer " |
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76 | + m_Clusterer.getClass().getName() + ":")); |
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77 | Enumeration enu = ((OptionHandler) m_Clusterer).listOptions(); |
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78 | while (enu.hasMoreElements()) { |
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79 | result.addElement(enu.nextElement()); |
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80 | } |
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81 | } |
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82 | |
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83 | return result.elements(); |
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84 | } |
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85 | |
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86 | /** |
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87 | * Parses a given list of options. |
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88 | * |
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89 | * @param options the list of options as an array of strings |
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90 | * @throws Exception if an option is not supported |
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91 | */ |
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92 | public void setOptions(String[] options) throws Exception { |
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93 | String tmpStr; |
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94 | |
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95 | tmpStr = Utils.getOption('W', options); |
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96 | if (tmpStr.length() > 0) { |
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97 | // This is just to set the classifier in case the option |
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98 | // parsing fails. |
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99 | setClusterer(AbstractClusterer.forName(tmpStr, null)); |
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100 | setClusterer(AbstractClusterer.forName(tmpStr, Utils.partitionOptions(options))); |
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101 | } |
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102 | else { |
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103 | // This is just to set the classifier in case the option |
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104 | // parsing fails. |
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105 | setClusterer(AbstractClusterer.forName(defaultClustererString(), null)); |
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106 | setClusterer(AbstractClusterer.forName(defaultClustererString(), Utils.partitionOptions(options))); |
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107 | } |
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108 | } |
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109 | |
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110 | /** |
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111 | * Gets the current settings of the clusterer. |
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112 | * |
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113 | * @return an array of strings suitable for passing to setOptions |
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114 | */ |
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115 | public String[] getOptions() { |
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116 | Vector result; |
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117 | String[] options; |
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118 | int i; |
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119 | |
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120 | result = new Vector(); |
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121 | |
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122 | result.add("-W"); |
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123 | result.add(getClusterer().getClass().getName()); |
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124 | |
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125 | if (getClusterer() instanceof OptionHandler) { |
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126 | result.add("--"); |
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127 | options = ((OptionHandler) getClusterer()).getOptions(); |
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128 | for (i = 0; i < options.length; i++) |
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129 | result.add(options[i]); |
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130 | } |
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131 | |
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132 | return (String[]) result.toArray(new String[result.size()]); |
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133 | } |
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134 | |
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135 | /** |
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136 | * Returns the tip text for this property |
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137 | * |
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138 | * @return tip text for this property suitable for |
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139 | * displaying in the explorer/experimenter gui |
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140 | */ |
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141 | public String clustererTipText() { |
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142 | return "The base clusterer to be used."; |
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143 | } |
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144 | |
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145 | /** |
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146 | * Set the base clusterer. |
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147 | * |
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148 | * @param value the classifier to use. |
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149 | */ |
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150 | public void setClusterer(Clusterer value) { |
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151 | m_Clusterer = value; |
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152 | } |
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153 | |
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154 | /** |
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155 | * Get the clusterer used as the base clusterer. |
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156 | * |
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157 | * @return the base clusterer |
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158 | */ |
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159 | public Clusterer getClusterer() { |
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160 | return m_Clusterer; |
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161 | } |
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162 | |
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163 | /** |
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164 | * Gets the clusterer specification string, which contains the class name of |
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165 | * the clusterer and any options to the clusterer |
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166 | * |
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167 | * @return the clusterer string |
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168 | */ |
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169 | protected String getClustererSpec() { |
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170 | String result; |
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171 | Clusterer clusterer; |
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172 | |
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173 | clusterer = getClusterer(); |
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174 | result = clusterer.getClass().getName(); |
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175 | |
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176 | if (clusterer instanceof OptionHandler) |
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177 | result += " " + Utils.joinOptions(((OptionHandler) clusterer).getOptions()); |
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178 | |
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179 | return result; |
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180 | } |
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181 | |
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182 | /** |
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183 | * Returns default capabilities of the clusterer. |
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184 | * |
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185 | * @return the capabilities of this clusterer |
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186 | */ |
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187 | public Capabilities getCapabilities() { |
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188 | Capabilities result; |
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189 | |
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190 | if (getClusterer() == null) |
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191 | result = super.getCapabilities(); |
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192 | else |
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193 | result = getClusterer().getCapabilities(); |
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194 | |
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195 | // set dependencies |
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196 | for (Capability cap: Capability.values()) |
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197 | result.enableDependency(cap); |
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198 | |
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199 | return result; |
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200 | } |
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201 | |
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202 | /** |
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203 | * Returns the number of clusters. |
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204 | * |
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205 | * @return the number of clusters generated for a training dataset. |
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206 | * @throws Exception if number of clusters could not be returned |
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207 | * successfully |
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208 | */ |
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209 | public int numberOfClusters() throws Exception { |
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210 | return m_Clusterer.numberOfClusters(); |
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211 | } |
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212 | } |
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