/* * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 2 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. */ /* * GroovyClassifier.java * Copyright (C) 2009 University of Waikato, Hamilton, New Zealand * */ package weka.classifiers.scripting; import weka.classifiers.Classifier; import weka.classifiers.AbstractClassifier; import weka.core.Capabilities; import weka.core.Instance; import weka.core.Instances; import weka.core.Option; import weka.core.RevisionUtils; import weka.core.Utils; import weka.core.OptionHandler; import weka.core.scripting.Groovy; import java.io.File; import java.util.Enumeration; import java.util.Vector; /** * A wrapper class for Groovy code. Even though the classifier is serializable, the trained classifier cannot be stored persistently. I.e., one cannot store a model file and re-load it at a later point in time again to make predictions. *

* * Valid options are:

* *

 -G <filename>
 *  The Groovy module to load (full path)
 *  Options after '--' will be passed on to the Groovy module.
* *
 -D
 *  If set, classifier is run in debug mode and
 *  may output additional info to the console
* * * Options after "--" will be passed on to the Groovy module. *

* In order to use Groovy, * the jar containing all the classes must be present in the CLASSPATH. * This jar is normally found in the embeddable * sub-directory of the Groovy installation. *

* Tested with Groovy 1.5.7. * * @author FracPete (fracpete at waikato dot ac dot nz) * @version $Revision: 5987 $ * @see Groovy */ public class GroovyClassifier extends AbstractClassifier { /** for serialization. */ private static final long serialVersionUID = -9078371491735496175L; /** the Groovy module. */ protected File m_GroovyModule = new File(System.getProperty("user.dir")); /** the options for the Groovy module. */ protected String[] m_GroovyOptions = new String[0]; /** the loaded Groovy object. */ transient protected Classifier m_GroovyObject = null; /** * default constructor. */ public GroovyClassifier() { super(); } /** * Returns a string describing classifier. * * @return a description suitable for * displaying in the explorer/experimenter gui */ public String globalInfo() { return "A wrapper class for Groovy code. Even though the classifier is " + "serializable, the trained classifier cannot be stored persistently. " + "I.e., one cannot store a model file and re-load it at a later point " + "in time again to make predictions."; } /** * Returns an enumeration describing the available options. * * @return an enumeration of all the available options. */ public Enumeration listOptions() { Vector result = new Vector(); result.addElement(new Option( "\tThe Groovy module to load (full path)\n" + "\tOptions after '--' will be passed on to the Groovy module.", "G", 1, "-G ")); Enumeration en = super.listOptions(); while (en.hasMoreElements()) result.addElement(en.nextElement()); return result.elements(); } /** * Parses a given list of options. * * @param options the list of options as an array of strings * @throws Exception if an option is not supported */ public void setOptions(String[] options) throws Exception { String tmpStr; m_GroovyOptions = new String[0]; tmpStr = Utils.getOption('G', options); if (tmpStr.length() != 0) setGroovyModule(new File(tmpStr)); else setGroovyModule(new File(System.getProperty("user.dir"))); setGroovyOptions(Utils.joinOptions(Utils.partitionOptions(options).clone())); super.setOptions(options); } /** * Gets the current settings of the Classifier. * * @return an array of strings suitable for passing to * setOptions */ public String[] getOptions() { Vector result; String[] options; int i; result = new Vector(); result.add("-G"); result.add("" + getGroovyModule().getAbsolutePath()); options = super.getOptions(); for (i = 0; i < options.length; i++) result.add(options[i]); if (m_GroovyOptions.length > 0) { options = m_GroovyOptions; result.add("--"); for (i = 0; i < options.length; i++) result.add(options[i]); } return result.toArray(new String[result.size()]); } /** * Returns the tip text for this property. * * @return tip text for this property suitable for * displaying in the explorer/experimenter gui */ public String GroovyModuleTipText() { return "The Groovy module to load and execute."; } /** * Sets the Groovy module. * * @param value the Groovy module */ public void setGroovyModule(File value) { m_GroovyModule = value; initGroovyObject(); } /** * Gets the Groovy module. * * @return the Groovy module */ public File getGroovyModule() { return m_GroovyModule; } /** * Returns the tip text for this property. * * @return tip text for this property suitable for * displaying in the explorer/experimenter gui */ public String GroovyOptionsTipText() { return "The options for the Groovy module."; } /** * Sets the Groovy module options. * * @param value the options */ public void setGroovyOptions(String value) { try { m_GroovyOptions = Utils.splitOptions(value).clone(); initGroovyObject(); } catch (Exception e) { m_GroovyOptions = new String[0]; e.printStackTrace(); } } /** * Gets the Groovy module options. * * @return the options */ public String getGroovyOptions() { return Utils.joinOptions(m_GroovyOptions); } /** * Returns default capabilities of the classifier. * * @return the capabilities of this classifier */ public Capabilities getCapabilities() { Capabilities result; if (m_GroovyObject == null) { result = new Capabilities(this); result.disableAll(); } else { result = m_GroovyObject.getCapabilities(); } result.enableAllAttributeDependencies(); result.enableAllClassDependencies(); return result; } /** * tries to initialize the groovy object and set its options. */ protected void initGroovyObject() { try { if (m_GroovyModule.isFile()) m_GroovyObject = (Classifier) Groovy.newInstance(m_GroovyModule, Classifier.class); else m_GroovyObject = null; if (m_GroovyObject != null) ((OptionHandler)m_GroovyObject).setOptions(m_GroovyOptions.clone()); } catch (Exception e) { m_GroovyObject = null; e.printStackTrace(); } } /** * Generates the classifier. * * @param instances set of instances serving as training data * @throws Exception if the classifier has not been generated successfully */ public void buildClassifier(Instances instances) throws Exception { if (!Groovy.isPresent()) throw new Exception("Groovy classes not in CLASSPATH!"); // try loading the module initGroovyObject(); // build the model if (m_GroovyObject != null) m_GroovyObject.buildClassifier(instances); else System.err.println("buildClassifier: No Groovy object present!"); } /** * Classifies a given instance. * * @param instance the instance to be classified * @return index of the predicted class * @throws Exception if an error occurred during the prediction */ public double classifyInstance(Instance instance) throws Exception { if (m_GroovyObject != null) return m_GroovyObject.classifyInstance(instance); else return Utils.missingValue(); } /** * Calculates the class membership probabilities for the given test instance. * * @param instance the instance to be classified * @return predicted class probability distribution * @throws Exception if class is numeric */ public double[] distributionForInstance(Instance instance) throws Exception { if (m_GroovyObject != null) return m_GroovyObject.distributionForInstance(instance); else return new double[instance.numClasses()]; } /** * Returns a description of the classifier. * * @return a description of the classifier as a string. */ public String toString() { if (m_GroovyObject != null) return m_GroovyObject.toString(); else return "No Groovy module loaded."; } /** * Returns the revision string. * * @return the revision */ public String getRevision() { return RevisionUtils.extract("$Revision: 5987 $"); } /** * Main method for testing this class. * * @param args the options */ public static void main(String [] args) { runClassifier(new GroovyClassifier(), args); } }