[4] | 1 | /* |
---|
| 2 | * This program is free software; you can redistribute it and/or modify |
---|
| 3 | * it under the terms of the GNU General Public License as published by |
---|
| 4 | * the Free Software Foundation; either version 2 of the License, or |
---|
| 5 | * (at your option) any later version. |
---|
| 6 | * |
---|
| 7 | * This program is distributed in the hope that it will be useful, |
---|
| 8 | * but WITHOUT ANY WARRANTY; without even the implied warranty of |
---|
| 9 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
---|
| 10 | * GNU General Public License for more details. |
---|
| 11 | * |
---|
| 12 | * You should have received a copy of the GNU General Public License |
---|
| 13 | * along with this program; if not, write to the Free Software |
---|
| 14 | * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. |
---|
| 15 | */ |
---|
| 16 | |
---|
| 17 | /* |
---|
| 18 | * SerializedClassifier.java |
---|
| 19 | * Copyright (C) 2007 University of Waikato, Hamilton, New Zealand |
---|
| 20 | */ |
---|
| 21 | |
---|
| 22 | package weka.classifiers.misc; |
---|
| 23 | |
---|
| 24 | import weka.classifiers.Classifier; |
---|
| 25 | import weka.classifiers.AbstractClassifier; |
---|
| 26 | import weka.core.Capabilities; |
---|
| 27 | import weka.core.Instance; |
---|
| 28 | import weka.core.Instances; |
---|
| 29 | import weka.core.Option; |
---|
| 30 | import weka.core.RevisionUtils; |
---|
| 31 | import weka.core.SerializationHelper; |
---|
| 32 | import weka.core.Utils; |
---|
| 33 | import weka.core.Capabilities.Capability; |
---|
| 34 | |
---|
| 35 | import java.io.File; |
---|
| 36 | import java.util.Enumeration; |
---|
| 37 | import java.util.Vector; |
---|
| 38 | |
---|
| 39 | /** |
---|
| 40 | <!-- globalinfo-start --> |
---|
| 41 | * A wrapper around a serialized classifier model. This classifier loads a serialized models and uses it to make predictions.<br/> |
---|
| 42 | * <br/> |
---|
| 43 | * Warning: since the serialized model doesn't get changed, cross-validation cannot bet used with this classifier. |
---|
| 44 | * <p/> |
---|
| 45 | <!-- globalinfo-end --> |
---|
| 46 | * |
---|
| 47 | <!-- options-start --> |
---|
| 48 | * Valid options are: <p/> |
---|
| 49 | * |
---|
| 50 | * <pre> -D |
---|
| 51 | * If set, classifier is run in debug mode and |
---|
| 52 | * may output additional info to the console</pre> |
---|
| 53 | * |
---|
| 54 | * <pre> -model <filename> |
---|
| 55 | * The file containing the serialized model. |
---|
| 56 | * (required)</pre> |
---|
| 57 | * |
---|
| 58 | <!-- options-end --> |
---|
| 59 | * |
---|
| 60 | * @author fracpete (fracpete at waikato dot ac dot nz) |
---|
| 61 | * @version $Revision: 5928 $ |
---|
| 62 | */ |
---|
| 63 | public class SerializedClassifier |
---|
| 64 | extends AbstractClassifier { |
---|
| 65 | |
---|
| 66 | /** for serialization */ |
---|
| 67 | private static final long serialVersionUID = 4599593909947628642L; |
---|
| 68 | |
---|
| 69 | /** the serialized classifier model used for making predictions */ |
---|
| 70 | protected transient Classifier m_Model = null; |
---|
| 71 | |
---|
| 72 | /** the file where the serialized model is stored */ |
---|
| 73 | protected File m_ModelFile = new File(System.getProperty("user.dir")); |
---|
| 74 | |
---|
| 75 | /** |
---|
| 76 | * Returns a string describing classifier |
---|
| 77 | * |
---|
| 78 | * @return a description suitable for displaying in the |
---|
| 79 | * explorer/experimenter gui |
---|
| 80 | */ |
---|
| 81 | public String globalInfo() { |
---|
| 82 | return |
---|
| 83 | "A wrapper around a serialized classifier model. This classifier loads " |
---|
| 84 | + "a serialized models and uses it to make predictions.\n\n" |
---|
| 85 | + "Warning: since the serialized model doesn't get changed, cross-validation " |
---|
| 86 | + "cannot bet used with this classifier."; |
---|
| 87 | } |
---|
| 88 | |
---|
| 89 | /** |
---|
| 90 | * Gets an enumeration describing the available options. |
---|
| 91 | * |
---|
| 92 | * @return an enumeration of all the available options. |
---|
| 93 | */ |
---|
| 94 | public Enumeration listOptions(){ |
---|
| 95 | Vector result; |
---|
| 96 | Enumeration enm; |
---|
| 97 | |
---|
| 98 | result = new Vector(); |
---|
| 99 | |
---|
| 100 | enm = super.listOptions(); |
---|
| 101 | while (enm.hasMoreElements()) |
---|
| 102 | result.addElement(enm.nextElement()); |
---|
| 103 | |
---|
| 104 | result.addElement(new Option( |
---|
| 105 | "\tThe file containing the serialized model.\n" |
---|
| 106 | + "\t(required)", |
---|
| 107 | "model", 1, "-model <filename>")); |
---|
| 108 | |
---|
| 109 | return result.elements(); |
---|
| 110 | } |
---|
| 111 | |
---|
| 112 | /** |
---|
| 113 | * returns the options of the current setup |
---|
| 114 | * |
---|
| 115 | * @return the current options |
---|
| 116 | */ |
---|
| 117 | public String[] getOptions(){ |
---|
| 118 | int i; |
---|
| 119 | Vector result; |
---|
| 120 | String[] options; |
---|
| 121 | |
---|
| 122 | result = new Vector(); |
---|
| 123 | |
---|
| 124 | options = super.getOptions(); |
---|
| 125 | for (i = 0; i < options.length; i++) |
---|
| 126 | result.add(options[i]); |
---|
| 127 | |
---|
| 128 | result.add("-model"); |
---|
| 129 | result.add("" + getModelFile()); |
---|
| 130 | |
---|
| 131 | return (String[]) result.toArray(new String[result.size()]); |
---|
| 132 | } |
---|
| 133 | |
---|
| 134 | /** |
---|
| 135 | * Parses the options for this object. <p/> |
---|
| 136 | * |
---|
| 137 | <!-- options-start --> |
---|
| 138 | * Valid options are: <p/> |
---|
| 139 | * |
---|
| 140 | * <pre> -D |
---|
| 141 | * If set, classifier is run in debug mode and |
---|
| 142 | * may output additional info to the console</pre> |
---|
| 143 | * |
---|
| 144 | * <pre> -model <filename> |
---|
| 145 | * The file containing the serialized model. |
---|
| 146 | * (required)</pre> |
---|
| 147 | * |
---|
| 148 | <!-- options-end --> |
---|
| 149 | * |
---|
| 150 | * @param options the options to use |
---|
| 151 | * @throws Exception if setting of options fails |
---|
| 152 | */ |
---|
| 153 | public void setOptions(String[] options) throws Exception { |
---|
| 154 | String tmpStr; |
---|
| 155 | |
---|
| 156 | super.setOptions(options); |
---|
| 157 | |
---|
| 158 | tmpStr = Utils.getOption("model", options); |
---|
| 159 | if (tmpStr.length() != 0) |
---|
| 160 | setModelFile(new File(tmpStr)); |
---|
| 161 | else |
---|
| 162 | setModelFile(new File(System.getProperty("user.dir"))); |
---|
| 163 | } |
---|
| 164 | |
---|
| 165 | /** |
---|
| 166 | * Returns the tip text for this property |
---|
| 167 | * |
---|
| 168 | * @return tip text for this property suitable for |
---|
| 169 | * displaying in the explorer/experimenter gui |
---|
| 170 | */ |
---|
| 171 | public String modelFileTipText() { |
---|
| 172 | return "The serialized classifier model to use for predictions."; |
---|
| 173 | } |
---|
| 174 | |
---|
| 175 | /** |
---|
| 176 | * Gets the file containing the serialized model. |
---|
| 177 | * |
---|
| 178 | * @return the file. |
---|
| 179 | */ |
---|
| 180 | public File getModelFile() { |
---|
| 181 | return m_ModelFile; |
---|
| 182 | } |
---|
| 183 | |
---|
| 184 | /** |
---|
| 185 | * Sets the file containing the serialized model. |
---|
| 186 | * |
---|
| 187 | * @param value the file. |
---|
| 188 | */ |
---|
| 189 | public void setModelFile(File value) { |
---|
| 190 | m_ModelFile = value; |
---|
| 191 | |
---|
| 192 | if (value.exists() && value.isFile()) { |
---|
| 193 | try { |
---|
| 194 | initModel(); |
---|
| 195 | } |
---|
| 196 | catch (Exception e) { |
---|
| 197 | throw new IllegalArgumentException("Cannot load model from file '" + value + "': " + e); |
---|
| 198 | } |
---|
| 199 | } |
---|
| 200 | } |
---|
| 201 | |
---|
| 202 | /** |
---|
| 203 | * Sets the fully built model to use, if one doesn't want to load a model |
---|
| 204 | * from a file or already deserialized a model from somewhere else. |
---|
| 205 | * |
---|
| 206 | * @param value the built model |
---|
| 207 | * @see #getCurrentModel() |
---|
| 208 | */ |
---|
| 209 | public void setModel(Classifier value) { |
---|
| 210 | m_Model = value; |
---|
| 211 | } |
---|
| 212 | |
---|
| 213 | /** |
---|
| 214 | * Gets the currently loaded model (can be null). Call buildClassifier method |
---|
| 215 | * to load model from file. |
---|
| 216 | * |
---|
| 217 | * @return the current model |
---|
| 218 | * @see #setModel(Classifier) |
---|
| 219 | */ |
---|
| 220 | public Classifier getCurrentModel() { |
---|
| 221 | return m_Model; |
---|
| 222 | } |
---|
| 223 | |
---|
| 224 | /** |
---|
| 225 | * loads the serialized model if necessary, throws an Exception if the |
---|
| 226 | * derserialization fails. |
---|
| 227 | * |
---|
| 228 | * @throws Exception if deserialization fails |
---|
| 229 | */ |
---|
| 230 | protected void initModel() throws Exception { |
---|
| 231 | if (m_Model == null) |
---|
| 232 | m_Model = (Classifier) SerializationHelper.read(m_ModelFile.getAbsolutePath()); |
---|
| 233 | } |
---|
| 234 | |
---|
| 235 | /** |
---|
| 236 | * Returns default capabilities of the base classifier. |
---|
| 237 | * |
---|
| 238 | * @return the capabilities of the base classifier |
---|
| 239 | */ |
---|
| 240 | public Capabilities getCapabilities() { |
---|
| 241 | Capabilities result; |
---|
| 242 | |
---|
| 243 | // init model if necessary |
---|
| 244 | try { |
---|
| 245 | initModel(); |
---|
| 246 | } |
---|
| 247 | catch (Exception e) { |
---|
| 248 | System.err.println(e); |
---|
| 249 | } |
---|
| 250 | |
---|
| 251 | if (m_Model != null) { |
---|
| 252 | result = m_Model.getCapabilities(); |
---|
| 253 | } else { |
---|
| 254 | result = new Capabilities(this); |
---|
| 255 | result.disableAll(); |
---|
| 256 | } |
---|
| 257 | |
---|
| 258 | // set dependencies |
---|
| 259 | for (Capability cap: Capability.values()) |
---|
| 260 | result.enableDependency(cap); |
---|
| 261 | |
---|
| 262 | result.setOwner(this); |
---|
| 263 | |
---|
| 264 | return result; |
---|
| 265 | } |
---|
| 266 | |
---|
| 267 | /** |
---|
| 268 | * Calculates the class membership probabilities for the given test |
---|
| 269 | * instance. |
---|
| 270 | * |
---|
| 271 | * @param instance the instance to be classified |
---|
| 272 | * @return preedicted class probability distribution |
---|
| 273 | * @throws Exception if distribution can't be computed successfully |
---|
| 274 | */ |
---|
| 275 | public double[] distributionForInstance(Instance instance) throws Exception { |
---|
| 276 | double[] result; |
---|
| 277 | |
---|
| 278 | // init model if necessary |
---|
| 279 | initModel(); |
---|
| 280 | |
---|
| 281 | result = m_Model.distributionForInstance(instance); |
---|
| 282 | |
---|
| 283 | return result; |
---|
| 284 | } |
---|
| 285 | |
---|
| 286 | /** |
---|
| 287 | * loads only the serialized classifier |
---|
| 288 | * |
---|
| 289 | * @param data the training instances |
---|
| 290 | * @throws Exception if something goes wrong |
---|
| 291 | */ |
---|
| 292 | public void buildClassifier(Instances data) throws Exception { |
---|
| 293 | // init model if necessary |
---|
| 294 | initModel(); |
---|
| 295 | |
---|
| 296 | // can classifier handle the data? |
---|
| 297 | getCapabilities().testWithFail(data); |
---|
| 298 | } |
---|
| 299 | |
---|
| 300 | /** |
---|
| 301 | * Returns a string representation of the classifier |
---|
| 302 | * |
---|
| 303 | * @return the string representation of the classifier |
---|
| 304 | */ |
---|
| 305 | public String toString() { |
---|
| 306 | StringBuffer result; |
---|
| 307 | |
---|
| 308 | if (m_Model == null) { |
---|
| 309 | result = new StringBuffer("No model loaded yet."); |
---|
| 310 | } |
---|
| 311 | else { |
---|
| 312 | result = new StringBuffer(); |
---|
| 313 | result.append("SerializedClassifier\n"); |
---|
| 314 | result.append("====================\n\n"); |
---|
| 315 | result.append("File: " + getModelFile() + "\n\n"); |
---|
| 316 | result.append(m_Model.toString()); |
---|
| 317 | } |
---|
| 318 | |
---|
| 319 | return result.toString(); |
---|
| 320 | } |
---|
| 321 | |
---|
| 322 | /** |
---|
| 323 | * Returns the revision string. |
---|
| 324 | * |
---|
| 325 | * @return the revision |
---|
| 326 | */ |
---|
| 327 | public String getRevision() { |
---|
| 328 | return RevisionUtils.extract("$Revision: 5928 $"); |
---|
| 329 | } |
---|
| 330 | |
---|
| 331 | /** |
---|
| 332 | * Runs the classifier with the given options |
---|
| 333 | * |
---|
| 334 | * @param args the commandline options |
---|
| 335 | */ |
---|
| 336 | public static void main(String[] args) { |
---|
| 337 | runClassifier(new SerializedClassifier(), args); |
---|
| 338 | } |
---|
| 339 | } |
---|