[4] | 1 | /* |
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| 2 | * This program is free software; you can redistribute it and/or modify |
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| 3 | * it under the terms of the GNU General Public License as published by |
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| 4 | * the Free Software Foundation; either version 2 of the License, or |
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| 5 | * (at your option) any later version. |
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| 6 | * |
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| 7 | * This program is distributed in the hope that it will be useful, |
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| 8 | * but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 9 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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| 10 | * GNU General Public License for more details. |
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| 11 | * |
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| 12 | * You should have received a copy of the GNU General Public License |
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| 13 | * along with this program; if not, write to the Free Software |
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| 14 | * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. |
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| 15 | */ |
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| 16 | |
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| 17 | /* |
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| 18 | * CostSensitiveAttributeEval.java |
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| 19 | * Copyright (C) 2008 University of Waikato, Hamilton, New Zealand |
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| 20 | * |
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| 21 | */ |
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| 22 | |
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| 23 | package weka.attributeSelection; |
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| 24 | |
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| 25 | import weka.core.OptionHandler; |
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| 26 | import weka.core.RevisionUtils; |
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| 27 | |
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| 28 | import java.util.BitSet; |
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| 29 | import java.io.Serializable; |
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| 30 | |
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| 31 | /** |
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| 32 | <!-- globalinfo-start --> |
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| 33 | * A meta subset evaluator that makes its base subset evaluator cost-sensitive. |
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| 34 | * <p/> |
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| 35 | <!-- globalinfo-end --> |
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| 36 | * |
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| 37 | <!-- options-start --> |
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| 38 | * Valid options are: <p/> |
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| 39 | * |
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| 40 | * <pre> -C <cost file name> |
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| 41 | * File name of a cost matrix to use. If this is not supplied, |
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| 42 | * a cost matrix will be loaded on demand. The name of the |
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| 43 | * on-demand file is the relation name of the training data |
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| 44 | * plus ".cost", and the path to the on-demand file is |
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| 45 | * specified with the -N option.</pre> |
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| 46 | * |
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| 47 | * <pre> -N <directory> |
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| 48 | * Name of a directory to search for cost files when loading |
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| 49 | * costs on demand (default current directory).</pre> |
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| 50 | * |
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| 51 | * <pre> -cost-matrix <matrix> |
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| 52 | * The cost matrix in Matlab single line format.</pre> |
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| 53 | * |
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| 54 | * <pre> -S <integer> |
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| 55 | * The seed to use for random number generation.</pre> |
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| 56 | * |
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| 57 | * <pre> -W |
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| 58 | * Full name of base evaluator. |
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| 59 | * (default: weka.attributeSelection.ReliefFAttributeEval)</pre> |
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| 60 | * |
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| 61 | * <pre> |
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| 62 | * Options specific to evaluator weka.attributeSelection.ReliefFAttributeEval: |
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| 63 | * </pre> |
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| 64 | * |
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| 65 | * <pre> -M <num instances> |
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| 66 | * Specify the number of instances to |
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| 67 | * sample when estimating attributes. |
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| 68 | * If not specified, then all instances |
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| 69 | * will be used.</pre> |
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| 70 | * |
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| 71 | * <pre> -D <seed> |
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| 72 | * Seed for randomly sampling instances. |
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| 73 | * (Default = 1)</pre> |
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| 74 | * |
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| 75 | * <pre> -K <number of neighbours> |
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| 76 | * Number of nearest neighbours (k) used |
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| 77 | * to estimate attribute relevances |
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| 78 | * (Default = 10).</pre> |
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| 79 | * |
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| 80 | * <pre> -W |
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| 81 | * Weight nearest neighbours by distance</pre> |
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| 82 | * |
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| 83 | * <pre> -A <num> |
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| 84 | * Specify sigma value (used in an exp |
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| 85 | * function to control how quickly |
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| 86 | * weights for more distant instances |
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| 87 | * decrease. Use in conjunction with -W. |
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| 88 | * Sensible value=1/5 to 1/10 of the |
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| 89 | * number of nearest neighbours. |
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| 90 | * (Default = 2)</pre> |
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| 91 | * |
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| 92 | <!-- options-end --> |
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| 93 | * |
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| 94 | * @author Mark Hall (mhall{[at]}pentaho{[dot]}com) |
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| 95 | * @version $Revision: 5563 $ |
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| 96 | */ |
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| 97 | public class CostSensitiveAttributeEval |
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| 98 | extends CostSensitiveASEvaluation |
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| 99 | implements Serializable, AttributeEvaluator, OptionHandler { |
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| 100 | |
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| 101 | /** For serialization */ |
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| 102 | static final long serialVersionUID = 4484876541145458447L; |
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| 103 | |
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| 104 | /** |
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| 105 | * Default constructor. |
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| 106 | */ |
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| 107 | public CostSensitiveAttributeEval() { |
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| 108 | setEvaluator(new ReliefFAttributeEval()); |
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| 109 | } |
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| 110 | |
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| 111 | /** |
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| 112 | * Return the name of the default evaluator. |
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| 113 | * |
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| 114 | * @return the name of the default evaluator |
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| 115 | */ |
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| 116 | public String defaultEvaluatorString() { |
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| 117 | return "weka.attributeSelection.ReliefFAttributeEval"; |
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| 118 | } |
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| 119 | |
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| 120 | /** |
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| 121 | * Set the base evaluator. |
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| 122 | * |
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| 123 | * @param newEvaluator the evaluator to use. |
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| 124 | * @throws IllegalArgumentException if the evaluator is not an instance of AttributeEvaluator |
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| 125 | */ |
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| 126 | public void setEvaluator(ASEvaluation newEvaluator) throws IllegalArgumentException { |
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| 127 | if (!(newEvaluator instanceof AttributeEvaluator)) { |
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| 128 | throw new IllegalArgumentException("Evaluator must be an AttributeEvaluator!"); |
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| 129 | } |
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| 130 | |
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| 131 | m_evaluator = newEvaluator; |
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| 132 | } |
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| 133 | |
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| 134 | /** |
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| 135 | * Evaluates an individual attribute. Delegates the actual evaluation to the |
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| 136 | * base attribute evaluator. |
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| 137 | * |
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| 138 | * @param attribute the index of the attribute to be evaluated |
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| 139 | * @return the "merit" of the attribute |
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| 140 | * @exception Exception if the attribute could not be evaluated |
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| 141 | */ |
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| 142 | public double evaluateAttribute(int attribute) throws Exception { |
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| 143 | return ((AttributeEvaluator)m_evaluator).evaluateAttribute(attribute); |
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| 144 | } |
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| 145 | |
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| 146 | /** |
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| 147 | * Returns the revision string. |
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| 148 | * |
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| 149 | * @return the revision |
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| 150 | */ |
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| 151 | public String getRevision() { |
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| 152 | return RevisionUtils.extract("$Revision: 5563 $"); |
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| 153 | } |
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| 154 | |
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| 155 | /** |
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| 156 | * Main method for testing this class. |
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| 157 | * |
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| 158 | * @param args the options |
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| 159 | */ |
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| 160 | public static void main (String[] args) { |
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| 161 | runEvaluator(new CostSensitiveAttributeEval(), args); |
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| 162 | } |
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| 163 | } |
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| 164 | |
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