[4] | 1 | /* |
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| 2 | * This program is free software; you can redistribute it and/or modify |
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| 3 | * it under the terms of the GNU General Public License as published by |
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| 4 | * the Free Software Foundation; either version 2 of the License, or |
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| 5 | * (at your option) any later version. |
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| 6 | * |
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| 7 | * This program is distributed in the hope that it will be useful, |
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| 8 | * but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 9 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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| 10 | * GNU General Public License for more details. |
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| 11 | * |
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| 12 | * You should have received a copy of the GNU General Public License |
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| 13 | * along with this program; if not, write to the Free Software |
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| 14 | * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. |
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| 15 | */ |
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| 16 | |
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| 17 | /* |
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| 18 | * ItemSet.java |
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| 19 | * Copyright (C) 1999 University of Waikato, Hamilton, New Zealand |
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| 20 | * |
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| 21 | */ |
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| 22 | |
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| 23 | package weka.associations; |
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| 24 | |
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| 25 | import weka.core.FastVector; |
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| 26 | import weka.core.Instance; |
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| 27 | import weka.core.Instances; |
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| 28 | import weka.core.RevisionHandler; |
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| 29 | import weka.core.RevisionUtils; |
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| 30 | |
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| 31 | import java.io.Serializable; |
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| 32 | import java.util.Enumeration; |
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| 33 | import java.util.Hashtable; |
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| 34 | |
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| 35 | /** |
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| 36 | * Class for storing a set of items. Item sets are stored in a lexicographic |
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| 37 | * order, which is determined by the header information of the set of instances |
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| 38 | * used for generating the set of items. All methods in this class assume that |
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| 39 | * item sets are stored in lexicographic order. |
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| 40 | * The class provides the general methods used for item sets in class - and |
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| 41 | * standard association rule mining. |
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| 42 | * |
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| 43 | * @author Eibe Frank (eibe@cs.waikato.ac.nz) |
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| 44 | * @version $Revision: 5130 $ |
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| 45 | */ |
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| 46 | public class ItemSet |
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| 47 | implements Serializable, RevisionHandler { |
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| 48 | |
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| 49 | /** for serialization */ |
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| 50 | private static final long serialVersionUID = 2724000045282835791L; |
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| 51 | |
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| 52 | /** The items stored as an array of of ints. */ |
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| 53 | protected int[] m_items; |
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| 54 | |
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| 55 | /** Counter for how many transactions contain this item set. */ |
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| 56 | protected int m_counter; |
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| 57 | |
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| 58 | /** The total number of transactions */ |
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| 59 | protected int m_totalTransactions; |
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| 60 | |
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| 61 | /** |
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| 62 | * Treat zeros as missing (rather than a value in their |
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| 63 | * own right) |
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| 64 | */ |
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| 65 | protected boolean m_treatZeroAsMissing = false; |
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| 66 | |
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| 67 | /** |
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| 68 | * Constructor |
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| 69 | * @param totalTrans the total number of transactions in the data |
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| 70 | */ |
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| 71 | public ItemSet(int totalTrans) { |
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| 72 | m_totalTransactions = totalTrans; |
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| 73 | } |
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| 74 | |
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| 75 | /** |
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| 76 | * Constructor |
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| 77 | * @param totalTrans the total number of transactions in the data |
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| 78 | * @param array the attribute values encoded in an int array |
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| 79 | */ |
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| 80 | public ItemSet(int totalTrans, int[] array){ |
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| 81 | |
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| 82 | m_totalTransactions = totalTrans; |
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| 83 | m_items = array; |
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| 84 | m_counter =1; |
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| 85 | } |
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| 86 | |
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| 87 | /** Contsructor |
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| 88 | * @param array the item set represented as an int array |
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| 89 | */ |
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| 90 | public ItemSet(int[] array){ |
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| 91 | |
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| 92 | m_items = array; |
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| 93 | m_counter = 0; |
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| 94 | } |
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| 95 | |
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| 96 | /** |
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| 97 | * Checks if an instance contains an item set. |
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| 98 | * |
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| 99 | * @param instance the instance to be tested |
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| 100 | * @return true if the given instance contains this item set |
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| 101 | */ |
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| 102 | public boolean containedBy(Instance instance) { |
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| 103 | |
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| 104 | if (instance instanceof weka.core.SparseInstance && m_treatZeroAsMissing) { |
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| 105 | int numInstVals = instance.numValues(); |
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| 106 | int numItemSetVals = m_items.length; |
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| 107 | |
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| 108 | for (int p1 = 0, p2 = 0; p1 < numInstVals || p2 < numItemSetVals; ) { |
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| 109 | int instIndex = Integer.MAX_VALUE; |
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| 110 | if (p1 < numInstVals) { |
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| 111 | instIndex = instance.index(p1); |
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| 112 | } |
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| 113 | int itemIndex = p2; |
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| 114 | |
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| 115 | if (m_items[itemIndex] > -1) { |
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| 116 | if (itemIndex != instIndex) { |
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| 117 | return false; |
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| 118 | } else { |
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| 119 | if (instance.isMissingSparse(p1)) { |
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| 120 | return false; |
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| 121 | } |
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| 122 | if (m_items[itemIndex] != (int)instance.valueSparse(p1)) { |
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| 123 | return false; |
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| 124 | } |
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| 125 | } |
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| 126 | |
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| 127 | p1++; |
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| 128 | p2++; |
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| 129 | } else { |
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| 130 | if (itemIndex < instIndex) { |
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| 131 | p2++; |
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| 132 | } else if (itemIndex == instIndex){ |
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| 133 | p2++; |
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| 134 | p1++; |
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| 135 | } |
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| 136 | } |
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| 137 | } |
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| 138 | } else { |
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| 139 | for (int i = 0; i < instance.numAttributes(); i++) |
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| 140 | if (m_items[i] > -1) { |
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| 141 | if (instance.isMissing(i) || |
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| 142 | (m_treatZeroAsMissing && (int)instance.value(i) == 0)) |
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| 143 | return false; |
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| 144 | if (m_items[i] != (int)instance.value(i)) |
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| 145 | return false; |
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| 146 | } |
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| 147 | } |
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| 148 | |
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| 149 | return true; |
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| 150 | } |
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| 151 | |
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| 152 | /** Deletes all item sets that don't have minimum support. |
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| 153 | * @return the reduced set of item sets |
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| 154 | * @param maxSupport the maximum support |
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| 155 | * @param itemSets the set of item sets to be pruned |
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| 156 | * @param minSupport the minimum number of transactions to be covered |
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| 157 | */ |
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| 158 | public static FastVector deleteItemSets(FastVector itemSets, |
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| 159 | int minSupport, |
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| 160 | int maxSupport) { |
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| 161 | |
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| 162 | FastVector newVector = new FastVector(itemSets.size()); |
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| 163 | |
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| 164 | for (int i = 0; i < itemSets.size(); i++) { |
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| 165 | ItemSet current = (ItemSet)itemSets.elementAt(i); |
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| 166 | if ((current.m_counter >= minSupport) |
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| 167 | && (current.m_counter <= maxSupport)) |
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| 168 | newVector.addElement(current); |
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| 169 | } |
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| 170 | return newVector; |
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| 171 | } |
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| 172 | |
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| 173 | /** |
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| 174 | * Tests if two item sets are equal. |
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| 175 | * |
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| 176 | * @param itemSet another item set |
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| 177 | * @return true if this item set contains the same items as the given one |
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| 178 | */ |
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| 179 | public boolean equals(Object itemSet) { |
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| 180 | |
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| 181 | if ((itemSet == null) || !(itemSet.getClass().equals(this.getClass()))) { |
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| 182 | return false; |
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| 183 | } |
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| 184 | if (m_items.length != ((ItemSet)itemSet).m_items.length) |
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| 185 | return false; |
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| 186 | for (int i = 0; i < m_items.length; i++) |
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| 187 | if (m_items[i] != ((ItemSet)itemSet).m_items[i]) |
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| 188 | return false; |
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| 189 | return true; |
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| 190 | } |
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| 191 | |
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| 192 | /** |
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| 193 | * Return a hashtable filled with the given item sets. |
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| 194 | * |
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| 195 | * @param itemSets the set of item sets to be used for filling the hash table |
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| 196 | * @param initialSize the initial size of the hashtable |
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| 197 | * @return the generated hashtable |
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| 198 | */ |
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| 199 | public static Hashtable getHashtable(FastVector itemSets, int initialSize) { |
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| 200 | |
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| 201 | Hashtable hashtable = new Hashtable(initialSize); |
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| 202 | |
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| 203 | for (int i = 0; i < itemSets.size(); i++) { |
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| 204 | ItemSet current = (ItemSet)itemSets.elementAt(i); |
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| 205 | hashtable.put(current, new Integer(current.m_counter)); |
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| 206 | } |
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| 207 | return hashtable; |
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| 208 | } |
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| 209 | |
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| 210 | /** |
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| 211 | * Produces a hash code for a item set. |
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| 212 | * |
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| 213 | * @return a hash code for a set of items |
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| 214 | */ |
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| 215 | public int hashCode() { |
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| 216 | |
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| 217 | long result = 0; |
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| 218 | |
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| 219 | for (int i = m_items.length-1; i >= 0; i--) |
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| 220 | result += (i * m_items[i]); |
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| 221 | return (int)result; |
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| 222 | } |
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| 223 | |
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| 224 | /** Merges all item sets in the set of (k-1)-item sets |
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| 225 | * to create the (k)-item sets and updates the counters. |
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| 226 | * @return the generated (k)-item sets |
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| 227 | * @param totalTrans thetotal number of transactions |
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| 228 | * @param itemSets the set of (k-1)-item sets |
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| 229 | * @param size the value of (k-1) |
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| 230 | */ |
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| 231 | public static FastVector mergeAllItemSets(FastVector itemSets, int size, |
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| 232 | int totalTrans) { |
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| 233 | |
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| 234 | FastVector newVector = new FastVector(); |
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| 235 | ItemSet result; |
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| 236 | int numFound, k; |
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| 237 | |
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| 238 | for (int i = 0; i < itemSets.size(); i++) { |
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| 239 | ItemSet first = (ItemSet)itemSets.elementAt(i); |
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| 240 | out: |
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| 241 | for (int j = i+1; j < itemSets.size(); j++) { |
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| 242 | ItemSet second = (ItemSet)itemSets.elementAt(j); |
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| 243 | result = new ItemSet(totalTrans); |
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| 244 | result.m_items = new int[first.m_items.length]; |
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| 245 | |
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| 246 | // Find and copy common prefix of size 'size' |
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| 247 | numFound = 0; |
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| 248 | k = 0; |
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| 249 | while (numFound < size) { |
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| 250 | if (first.m_items[k] == second.m_items[k]) { |
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| 251 | if (first.m_items[k] != -1) |
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| 252 | numFound++; |
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| 253 | result.m_items[k] = first.m_items[k]; |
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| 254 | } else |
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| 255 | break out; |
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| 256 | k++; |
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| 257 | } |
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| 258 | |
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| 259 | // Check difference |
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| 260 | while (k < first.m_items.length) { |
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| 261 | if ((first.m_items[k] != -1) && (second.m_items[k] != -1)) |
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| 262 | break; |
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| 263 | else { |
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| 264 | if (first.m_items[k] != -1) |
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| 265 | result.m_items[k] = first.m_items[k]; |
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| 266 | else |
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| 267 | result.m_items[k] = second.m_items[k]; |
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| 268 | } |
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| 269 | k++; |
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| 270 | } |
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| 271 | if (k == first.m_items.length) { |
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| 272 | result.m_counter = 0; |
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| 273 | |
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| 274 | newVector.addElement(result); |
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| 275 | } |
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| 276 | } |
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| 277 | } |
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| 278 | return newVector; |
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| 279 | } |
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| 280 | |
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| 281 | /** |
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| 282 | * Prunes a set of (k)-item sets using the given (k-1)-item sets. |
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| 283 | * |
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| 284 | * @param toPrune the set of (k)-item sets to be pruned |
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| 285 | * @param kMinusOne the (k-1)-item sets to be used for pruning |
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| 286 | * @return the pruned set of item sets |
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| 287 | */ |
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| 288 | public static FastVector pruneItemSets(FastVector toPrune, Hashtable kMinusOne) { |
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| 289 | |
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| 290 | FastVector newVector = new FastVector(toPrune.size()); |
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| 291 | int help, j; |
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| 292 | |
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| 293 | for (int i = 0; i < toPrune.size(); i++) { |
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| 294 | ItemSet current = (ItemSet)toPrune.elementAt(i); |
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| 295 | for (j = 0; j < current.m_items.length; j++) |
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| 296 | if (current.m_items[j] != -1) { |
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| 297 | help = current.m_items[j]; |
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| 298 | current.m_items[j] = -1; |
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| 299 | if (kMinusOne.get(current) == null) { |
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| 300 | current.m_items[j] = help; |
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| 301 | break; |
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| 302 | } else{ |
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| 303 | current.m_items[j] = help; |
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| 304 | } |
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| 305 | } |
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| 306 | if (j == current.m_items.length) |
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| 307 | newVector.addElement(current); |
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| 308 | } |
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| 309 | return newVector; |
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| 310 | } |
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| 311 | |
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| 312 | /** |
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| 313 | * Prunes a set of rules. |
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| 314 | * |
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| 315 | * @param rules a two-dimensional array of lists of item sets. The first list |
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| 316 | * of item sets contains the premises, the second one the consequences. |
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| 317 | * @param minConfidence the minimum confidence the rules have to have |
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| 318 | */ |
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| 319 | public static void pruneRules(FastVector[] rules, double minConfidence) { |
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| 320 | |
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| 321 | FastVector newPremises = new FastVector(rules[0].size()), |
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| 322 | newConsequences = new FastVector(rules[1].size()), |
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| 323 | newConf = new FastVector(rules[2].size()); |
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| 324 | |
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| 325 | for (int i = 0; i < rules[0].size(); i++) |
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| 326 | if (!(((Double)rules[2].elementAt(i)).doubleValue() < |
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| 327 | minConfidence)) { |
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| 328 | newPremises.addElement(rules[0].elementAt(i)); |
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| 329 | newConsequences.addElement(rules[1].elementAt(i)); |
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| 330 | newConf.addElement(rules[2].elementAt(i)); |
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| 331 | } |
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| 332 | rules[0] = newPremises; |
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| 333 | rules[1] = newConsequences; |
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| 334 | rules[2] = newConf; |
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| 335 | } |
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| 336 | |
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| 337 | /** |
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| 338 | * Converts the header info of the given set of instances into a set |
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| 339 | * of item sets (singletons). The ordering of values in the header file |
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| 340 | * determines the lexicographic order. |
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| 341 | * |
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| 342 | * @param instances the set of instances whose header info is to be used |
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| 343 | * @return a set of item sets, each containing a single item |
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| 344 | * @exception Exception if singletons can't be generated successfully |
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| 345 | */ |
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| 346 | public static FastVector singletons(Instances instances) throws Exception { |
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| 347 | |
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| 348 | FastVector setOfItemSets = new FastVector(); |
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| 349 | ItemSet current; |
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| 350 | |
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| 351 | for (int i = 0; i < instances.numAttributes(); i++) { |
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| 352 | if (instances.attribute(i).isNumeric()) |
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| 353 | throw new Exception("Can't handle numeric attributes!"); |
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| 354 | for (int j = 0; j < instances.attribute(i).numValues(); j++) { |
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| 355 | current = new ItemSet(instances.numInstances()); |
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| 356 | current.m_items = new int[instances.numAttributes()]; |
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| 357 | for (int k = 0; k < instances.numAttributes(); k++) |
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| 358 | current.m_items[k] = -1; |
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| 359 | current.m_items[i] = j; |
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| 360 | |
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| 361 | setOfItemSets.addElement(current); |
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| 362 | } |
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| 363 | } |
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| 364 | return setOfItemSets; |
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| 365 | } |
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| 366 | |
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| 367 | /** |
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| 368 | * Outputs the support for an item set. |
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| 369 | * |
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| 370 | * @return the support |
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| 371 | */ |
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| 372 | public int support() { |
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| 373 | |
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| 374 | return m_counter; |
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| 375 | } |
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| 376 | |
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| 377 | /** |
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| 378 | * Returns the contents of an item set as a string. |
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| 379 | * |
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| 380 | * @param instances contains the relevant header information |
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| 381 | * @return string describing the item set |
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| 382 | */ |
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| 383 | public String toString(Instances instances) { |
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| 384 | |
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| 385 | StringBuffer text = new StringBuffer(); |
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| 386 | |
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| 387 | for (int i = 0; i < instances.numAttributes(); i++) |
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| 388 | if (m_items[i] != -1) { |
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| 389 | text.append(instances.attribute(i).name()+'='); |
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| 390 | text.append(instances.attribute(i).value(m_items[i])+' '); |
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| 391 | } |
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| 392 | text.append(m_counter); |
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| 393 | return text.toString(); |
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| 394 | } |
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| 395 | |
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| 396 | /** |
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| 397 | * Updates counter of item set with respect to given transaction. |
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| 398 | * |
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| 399 | * @param instance the instance to be used for ubdating the counter |
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| 400 | */ |
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| 401 | public void upDateCounter(Instance instance) { |
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| 402 | |
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| 403 | if (containedBy(instance)) |
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| 404 | m_counter++; |
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| 405 | } |
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| 406 | |
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| 407 | /** |
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| 408 | * Updates counters for a set of item sets and a set of instances. |
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| 409 | * |
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| 410 | * @param itemSets the set of item sets which are to be updated |
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| 411 | * @param instances the instances to be used for updating the counters |
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| 412 | */ |
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| 413 | public static void upDateCounters(FastVector itemSets, Instances instances) { |
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| 414 | |
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| 415 | for (int i = 0; i < instances.numInstances(); i++) { |
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| 416 | Enumeration enu = itemSets.elements(); |
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| 417 | while (enu.hasMoreElements()) |
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| 418 | ((ItemSet)enu.nextElement()).upDateCounter(instances.instance(i)); |
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| 419 | } |
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| 420 | } |
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| 421 | |
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| 422 | /** Gets the counter |
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| 423 | * @return the counter |
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| 424 | */ |
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| 425 | public int counter(){ |
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| 426 | |
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| 427 | return m_counter; |
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| 428 | } |
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| 429 | |
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| 430 | /** Gest the item set as an int array |
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| 431 | * @return int array represneting an item set |
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| 432 | */ |
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| 433 | public int[] items(){ |
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| 434 | |
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| 435 | return m_items; |
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| 436 | } |
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| 437 | |
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| 438 | /** Gest the index of the value of the specified attribute |
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| 439 | * @param k the attribute index |
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| 440 | * @return the index of the attribute value |
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| 441 | */ |
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| 442 | public int itemAt(int k){ |
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| 443 | |
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| 444 | return m_items[k]; |
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| 445 | } |
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| 446 | |
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| 447 | /** Sets the counter |
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| 448 | * @param count the counter |
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| 449 | */ |
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| 450 | public void setCounter(int count){ |
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| 451 | |
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| 452 | m_counter = count; |
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| 453 | } |
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| 454 | |
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| 455 | /** Sets an item sets |
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| 456 | * @param items an int array representing an item set |
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| 457 | */ |
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| 458 | public void setItem(int[] items){ |
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| 459 | |
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| 460 | m_items = items; |
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| 461 | } |
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| 462 | |
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| 463 | /** Sets the index of an attribute value |
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| 464 | * @param value the inex of the attribute value |
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| 465 | * @param k the index of the attribute |
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| 466 | */ |
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| 467 | public void setItemAt(int value, int k){ |
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| 468 | |
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| 469 | m_items[k] = value; |
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| 470 | } |
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| 471 | |
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| 472 | /** |
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| 473 | * Sets whether zeros (i.e. the first value of a nominal attribute) |
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| 474 | * should be treated as missing values. |
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| 475 | * |
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| 476 | * @param z true if zeros should be treated as missing values. |
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| 477 | */ |
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| 478 | public void setTreatZeroAsMissing(boolean z) { |
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| 479 | m_treatZeroAsMissing = z; |
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| 480 | } |
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| 481 | |
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| 482 | /** |
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| 483 | * Gets whether zeros (i.e. the first value of a nominal attribute) |
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| 484 | * is to be treated int he same way as missing values. |
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| 485 | * |
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| 486 | * @return true if zeros are to be treated like missing values. |
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| 487 | */ |
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| 488 | public boolean getTreatZeroAsMissing() { |
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| 489 | return m_treatZeroAsMissing; |
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| 490 | } |
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| 491 | |
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| 492 | /** |
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| 493 | * Returns the revision string. |
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| 494 | * |
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| 495 | * @return the revision |
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| 496 | */ |
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| 497 | public String getRevision() { |
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| 498 | return RevisionUtils.extract("$Revision: 5130 $"); |
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| 499 | } |
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| 500 | } |
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