1 | /* |
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2 | * This program is free software; you can redistribute it and/or modify |
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3 | * it under the terms of the GNU General Public License as published by |
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4 | * the Free Software Foundation; either version 2 of the License, or |
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5 | * (at your option) any later version. |
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6 | * |
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7 | * This program is distributed in the hope that it will be useful, |
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8 | * but WITHOUT ANY WARRANTY; without even the implied warranty of |
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9 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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10 | * GNU General Public License for more details. |
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11 | * |
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12 | * You should have received a copy of the GNU General Public License |
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13 | * along with this program; if not, write to the Free Software |
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14 | * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. |
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15 | */ |
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16 | |
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17 | /* |
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18 | * AssociatorEvaluation.java |
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19 | * Copyright (C) 2006 University of Waikato, Hamilton, New Zealand |
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20 | */ |
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21 | |
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22 | package weka.associations; |
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23 | |
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24 | import weka.core.Instances; |
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25 | import weka.core.Option; |
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26 | import weka.core.OptionHandler; |
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27 | import weka.core.RevisionHandler; |
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28 | import weka.core.RevisionUtils; |
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29 | import weka.core.Utils; |
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30 | import weka.core.Drawable; |
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31 | import weka.core.converters.ConverterUtils.DataSource; |
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32 | |
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33 | import java.util.Enumeration; |
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34 | import java.io.BufferedWriter; |
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35 | import java.io.FileWriter; |
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36 | |
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37 | /** |
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38 | * Class for evaluating Associaters. |
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39 | * |
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40 | * @author fracpete (fracpete at waikato dot ac dot nz) |
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41 | * @version $Revision: 1.5 $ |
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42 | */ |
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43 | public class AssociatorEvaluation |
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44 | implements RevisionHandler { |
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45 | |
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46 | /** the result string */ |
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47 | protected StringBuffer m_Result; |
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48 | |
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49 | /** |
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50 | * default constructor |
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51 | */ |
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52 | public AssociatorEvaluation() { |
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53 | super(); |
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54 | |
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55 | m_Result = new StringBuffer(); |
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56 | } |
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57 | |
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58 | /** |
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59 | * Generates an option string to output on the commandline. |
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60 | * |
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61 | * @param associator the associator to generate the string for |
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62 | * @return the option string |
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63 | */ |
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64 | protected static String makeOptionString(Associator associator) { |
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65 | StringBuffer text; |
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66 | |
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67 | text = new StringBuffer(); |
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68 | |
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69 | // general options |
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70 | text.append("\nGeneral options:\n\n"); |
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71 | text.append("-t <training file>\n"); |
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72 | text.append("\tThe name of the training file.\n"); |
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73 | text.append("-g <name of graph file>\n"); |
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74 | text.append("\tOutputs the graph representation (if supported) of the associator to a file.\n"); |
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75 | |
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76 | // associator specific options, if any |
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77 | if (associator instanceof OptionHandler) { |
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78 | text.append( |
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79 | "\nOptions specific to " |
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80 | + associator.getClass().getName().replaceAll(".*\\.", "") + ":\n\n"); |
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81 | |
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82 | Enumeration enm = ((OptionHandler) associator).listOptions(); |
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83 | while (enm.hasMoreElements()) { |
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84 | Option option = (Option) enm.nextElement(); |
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85 | text.append(option.synopsis() + "\n"); |
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86 | text.append(option.description() + "\n"); |
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87 | } |
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88 | } |
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89 | |
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90 | return text.toString(); |
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91 | } |
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92 | |
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93 | /** |
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94 | * Evaluates an associator with the options given in an array of strings. |
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95 | * |
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96 | * @param associatorString class of associator as a string |
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97 | * @param options the array of string containing the options |
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98 | * @throws Exception if model could not be evaluated successfully |
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99 | * @return a string describing the results |
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100 | */ |
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101 | public static String evaluate(String associatorString, String[] options) throws Exception { |
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102 | Associator associator; |
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103 | |
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104 | // Create associator |
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105 | try { |
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106 | associator = (Associator) Class.forName(associatorString).newInstance(); |
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107 | } |
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108 | catch (Exception e) { |
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109 | throw new Exception("Can't find class with name " + associatorString + '.'); |
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110 | } |
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111 | |
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112 | return evaluate(associator, options); |
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113 | } |
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114 | |
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115 | /** |
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116 | * Evaluates the associator with the given commandline options and returns |
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117 | * the evaluation string. |
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118 | * |
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119 | * @param associator the Associator to evaluate |
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120 | * @param options the commandline options |
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121 | * @return the generated output string |
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122 | * @throws Exception if evaluation fails |
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123 | */ |
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124 | public static String evaluate(Associator associator, String[] options) |
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125 | throws Exception { |
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126 | |
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127 | String trainFileString = ""; |
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128 | String graphFileName = ""; |
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129 | AssociatorEvaluation eval; |
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130 | DataSource loader; |
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131 | |
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132 | // help? |
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133 | if (Utils.getFlag('h', options)) |
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134 | throw new Exception("\nHelp requested.\n" + makeOptionString(associator)); |
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135 | |
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136 | try { |
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137 | // general options |
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138 | trainFileString = Utils.getOption('t', options); |
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139 | if (trainFileString.length() == 0) |
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140 | throw new Exception("No training file given!"); |
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141 | loader = new DataSource(trainFileString); |
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142 | |
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143 | graphFileName = Utils.getOption('g', options); |
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144 | |
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145 | // associator specific options |
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146 | if (associator instanceof OptionHandler) { |
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147 | ((OptionHandler) associator).setOptions(options); |
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148 | } |
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149 | |
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150 | // left-over options? |
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151 | Utils.checkForRemainingOptions(options); |
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152 | } |
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153 | catch (Exception e) { |
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154 | throw new Exception( |
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155 | "\nWeka exception: " |
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156 | + e.getMessage() + "\n" |
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157 | + makeOptionString(associator)); |
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158 | } |
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159 | |
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160 | // load file and build associations |
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161 | eval = new AssociatorEvaluation(); |
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162 | String results = eval.evaluate(associator, new Instances(loader.getDataSet())); |
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163 | |
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164 | // If associator is drawable output string describing graph |
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165 | if ((associator instanceof Drawable) && (graphFileName.length() != 0)) { |
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166 | BufferedWriter writer = new BufferedWriter(new FileWriter(graphFileName)); |
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167 | writer.write(((Drawable) associator).graph()); |
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168 | writer.newLine(); |
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169 | writer.flush(); |
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170 | writer.close(); |
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171 | } |
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172 | |
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173 | return results; |
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174 | } |
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175 | |
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176 | /** |
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177 | * Evaluates the associator with the given commandline options and returns |
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178 | * the evaluation string. |
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179 | * |
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180 | * @param associator the Associator to evaluate |
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181 | * @param data the data to run the associator with |
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182 | * @return the generated output string |
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183 | * @throws Exception if evaluation fails |
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184 | */ |
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185 | public String evaluate(Associator associator, Instances data) |
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186 | throws Exception { |
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187 | |
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188 | long startTime; |
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189 | long endTime; |
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190 | |
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191 | // build associations |
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192 | startTime = System.currentTimeMillis(); |
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193 | associator.buildAssociations(data); |
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194 | endTime = System.currentTimeMillis(); |
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195 | |
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196 | m_Result = new StringBuffer(associator.toString()); |
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197 | m_Result.append("\n=== Evaluation ===\n\n"); |
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198 | m_Result.append("Elapsed time: " + (((double) (endTime - startTime)) / 1000) + "s"); |
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199 | m_Result.append("\n"); |
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200 | |
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201 | return m_Result.toString(); |
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202 | } |
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203 | |
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204 | /** |
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205 | * Tests whether the current evaluation object is equal to another |
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206 | * evaluation object |
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207 | * |
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208 | * @param obj the object to compare against |
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209 | * @return true if the two objects are equal |
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210 | */ |
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211 | public boolean equals(Object obj) { |
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212 | if ((obj == null) || !(obj.getClass().equals(this.getClass()))) |
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213 | return false; |
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214 | |
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215 | AssociatorEvaluation cmp = (AssociatorEvaluation) obj; |
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216 | |
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217 | // TODO: better comparison??? |
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218 | String associatingResults1 = m_Result.toString().replaceAll("Elapsed time.*", ""); |
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219 | String associatingResults2 = cmp.m_Result.toString().replaceAll("Elapsed time.*", ""); |
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220 | if (!associatingResults1.equals(associatingResults2)) |
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221 | return false; |
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222 | |
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223 | return true; |
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224 | } |
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225 | |
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226 | /** |
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227 | * returns a summary string of the evaluation with a no title |
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228 | * |
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229 | * @return the summary string |
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230 | */ |
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231 | public String toSummaryString() { |
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232 | return toSummaryString(""); |
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233 | } |
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234 | |
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235 | /** |
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236 | * returns a summary string of the evaluation with a default title |
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237 | * |
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238 | * @param title the title to print before the result |
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239 | * @return the summary string |
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240 | */ |
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241 | public String toSummaryString(String title) { |
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242 | StringBuffer result; |
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243 | |
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244 | result = new StringBuffer(title); |
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245 | if (title.length() != 0) |
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246 | result.append("\n"); |
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247 | result.append(m_Result); |
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248 | |
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249 | return result.toString(); |
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250 | } |
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251 | |
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252 | /** |
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253 | * returns the current result |
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254 | * |
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255 | * @return the currently stored result |
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256 | * @see #toSummaryString() |
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257 | */ |
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258 | public String toString() { |
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259 | return toSummaryString(); |
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260 | } |
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261 | |
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262 | /** |
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263 | * Returns the revision string. |
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264 | * |
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265 | * @return the revision |
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266 | */ |
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267 | public String getRevision() { |
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268 | return RevisionUtils.extract("$Revision: 1.5 $"); |
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269 | } |
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270 | |
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271 | /** |
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272 | * A test method for this class. Just extracts the first command line |
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273 | * argument as an associator class name and calls evaluate. |
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274 | * |
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275 | * @param args an array of command line arguments, the first of which |
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276 | * must be the class name of an associator. |
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277 | */ |
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278 | public static void main(String[] args) { |
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279 | try { |
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280 | if (args.length == 0) { |
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281 | throw new Exception( |
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282 | "The first argument must be the class name of a kernel"); |
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283 | } |
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284 | String associator = args[0]; |
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285 | args[0] = ""; |
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286 | System.out.println(evaluate(associator, args)); |
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287 | } |
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288 | catch (Exception ex) { |
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289 | ex.printStackTrace(); |
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290 | System.err.println(ex.getMessage()); |
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291 | } |
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292 | } |
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293 | } |
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