source: branches/MetisMQI/src/main/java/weka/gui/Main.java

/*
 *    This program is free software; you can redistribute it and/or modify
 *    it under the terms of the GNU General Public License as published by
 *    the Free Software Foundation; either version 2 of the License, or
 *    (at your option) any later version.
 *
 *    This program is distributed in the hope that it will be useful,
 *    but WITHOUT ANY WARRANTY; without even the implied warranty of
 *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *    GNU General Public License for more details.
 *
 *    You should have received a copy of the GNU General Public License
 *    along with this program; if not, write to the Free Software
 *    Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
 */

/*
 * Main.java
 * Copyright (C) 2006 University of Waikato, Hamilton, New Zealand
 *
 */

package weka.gui;

import weka.classifiers.bayes.net.GUI;
import weka.classifiers.evaluation.ThresholdCurve;
import weka.core.Copyright;
import weka.core.Instances;
import weka.core.Memory;
import weka.core.Option;
import weka.core.OptionHandler;
import weka.core.SelectedTag;
import weka.core.SystemInfo;
import weka.core.Tag;
import weka.core.Utils;
import weka.core.Version;
import weka.core.scripting.Groovy;
import weka.core.scripting.Jython;
import weka.gui.arffviewer.ArffViewerMainPanel;
import weka.gui.beans.KnowledgeFlowApp;
import weka.gui.beans.StartUpListener;
import weka.gui.boundaryvisualizer.BoundaryVisualizer;
import weka.gui.experiment.Experimenter;
import weka.gui.explorer.Explorer;
import weka.gui.graphvisualizer.GraphVisualizer;
import weka.gui.scripting.GroovyPanel;
import weka.gui.scripting.JythonPanel;
import weka.gui.sql.SqlViewer;
import weka.gui.treevisualizer.Node;
import weka.gui.treevisualizer.NodePlace;
import weka.gui.treevisualizer.PlaceNode2;
import weka.gui.treevisualizer.TreeBuild;
import weka.gui.treevisualizer.TreeVisualizer;
import weka.gui.visualize.PlotData2D;
import weka.gui.visualize.ThresholdVisualizePanel;
import weka.gui.visualize.VisualizePanel;

import java.awt.BorderLayout;
import java.awt.Color;
import java.awt.Component;
import java.awt.Container;
import java.awt.Dimension;
import java.awt.Graphics;
import java.awt.GridLayout;
import java.awt.Image;
import java.awt.LayoutManager;
import java.awt.Point;
import java.awt.Toolkit;
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
import java.awt.event.WindowAdapter;
import java.awt.event.WindowEvent;
import java.io.BufferedReader;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileReader;
import java.io.Reader;
import java.util.Collections;
import java.util.Enumeration;
import java.util.HashSet;
import java.util.Hashtable;
import java.util.Iterator;
import java.util.Vector;

import javax.swing.BorderFactory;
import javax.swing.ImageIcon;
import javax.swing.JDesktopPane;
import javax.swing.JFileChooser;
import javax.swing.JFrame;
import javax.swing.JInternalFrame;
import javax.swing.JLabel;
import javax.swing.JMenu;
import javax.swing.JMenuBar;
import javax.swing.JMenuItem;
import javax.swing.JOptionPane;
import javax.swing.JPanel;
import javax.swing.JScrollPane;
import javax.swing.JSeparator;
import javax.swing.JTable;
import javax.swing.SwingConstants;
import javax.swing.WindowConstants;
import javax.swing.event.InternalFrameAdapter;
import javax.swing.event.InternalFrameEvent;

/**
 * Menu-based GUI for Weka, replacement for the GUIChooser.
 *
 <!-- options-start -->
 * Valid options are: <p/>
 * 
 * <pre> -gui &lt;MDI|SDI&gt;
 *  Determines the layout of the GUI:
 *  MDI = MDI Layout
 *  SDI = SDI Layout
 *  (default: MDI)</pre>
 * 
 <!-- options-end -->
 *
 * @author  fracpete (fracpete at waikato dot ac dot nz)
 * @version $Revision: 5837 $
 */
public class Main
  extends JFrame
  implements OptionHandler {
  
  /** for serialization. */
  private static final long serialVersionUID = 1453813254824253849L;
  
  /**
   * DesktopPane with background image.
   * 
   * @author  fracpete (fracpete at waikato dot ac dot nz)
   * @version $Revision: 5837 $
   */
  public static class BackgroundDesktopPane
    extends JDesktopPane {
    
    /** for serialization. */
    private static final long serialVersionUID = 2046713123452402745L;
    
    /** the actual background image. */
    protected Image m_Background;
    
    /**
     * intializes the desktop pane.
     * 
     * @param image     the image to use as background
     */
    public BackgroundDesktopPane(String image) {
      super();
      
      try {
        m_Background = Toolkit.getDefaultToolkit().getImage(ClassLoader.getSystemResource(image));
      }
      catch (Exception e) {
        e.printStackTrace();
      }
    }
    
    /**
     * draws the background image.
     * 
     * @param g         the graphics context
     */
    public void paintComponent(Graphics g) {
      super.paintComponent(g);
     
      if (m_Background != null) {
        g.setColor(Color.WHITE);
        g.clearRect(0, 0, getWidth(), getHeight());
        
        int width  = m_Background.getWidth(null);
        int height = m_Background.getHeight(null);
        int x = (getWidth() - width) / 2;
        int y = (getHeight() - height) / 2;
        g.drawImage(m_Background, x, y, width, height, this);
      }
    }
  }
  
  /**
   * Specialized JFrame class.
   * 
   * @author  fracpete (fracpete at waikato dot ac dot nz)
   * @version $Revision: 5837 $
   */
  public static class ChildFrameSDI 
    extends JFrame {
    
    /** for serialization. */
    private static final long serialVersionUID = 8588293938686425618L;
    
    /** the parent frame. */
    protected Main m_Parent;
    
    /**
     * constructs a new internal frame that knows about its parent.
     * 
     * @param parent    the parent frame
     * @param title     the title of the frame
     */
    public ChildFrameSDI(Main parent, String title) {
      super(title);
      
      m_Parent = parent;

      addWindowListener(new WindowAdapter() {
        public void windowActivated(WindowEvent e) {
          // update title of parent
          if (getParentFrame() != null)
            getParentFrame().createTitle(getTitle());
        }
      });
      
      // add to parent
      if (getParentFrame() != null) {
        getParentFrame().addChildFrame(this);
        setIconImage(getParentFrame().getIconImage());
      }
    }
    
    /**
     * returns the parent frame, can be null.
     * 
     * @return          the parent frame
     */
    public Main getParentFrame() {
      return m_Parent;
    }
    
    /**
     * de-registers the child frame with the parent first.
     */
    public void dispose() {
      if (getParentFrame() != null) {
        getParentFrame().removeChildFrame(this);
        getParentFrame().createTitle("");
      }
      
      super.dispose();
    }
  }
  
  /**
   * Specialized JInternalFrame class.
   * 
   * @author  fracpete (fracpete at waikato dot ac dot nz)
   * @version $Revision: 5837 $
   */
  public static class ChildFrameMDI
    extends JInternalFrame {
    
    /** for serialization. */
    private static final long serialVersionUID = 3772573515346899959L;
    
    /** the parent frame. */
    protected Main m_Parent;
    
    /**
     * constructs a new internal frame that knows about its parent.
     * 
     * @param parent    the parent frame
     * @param title     the title of the frame
     */
    public ChildFrameMDI(Main parent, String title) {
      super(title, true, true, true, true);
      
      m_Parent = parent;

      addInternalFrameListener(new InternalFrameAdapter() {
        public void internalFrameActivated(InternalFrameEvent e) {
          // update title of parent
          if (getParentFrame() != null)
            getParentFrame().createTitle(getTitle());
        }
      });
      
      // add to parent
      if (getParentFrame() != null) {
        getParentFrame().addChildFrame(this);
        getParentFrame().jDesktopPane.add(this);
      }
    }
    
    /**
     * returns the parent frame, can be null.
     * 
     * @return          the parent frame
     */
    public Main getParentFrame() {
      return m_Parent;
    }
    
    /**
     * de-registers the child frame with the parent first.
     */
    public void dispose() {
      if (getParentFrame() != null) {
        getParentFrame().removeChildFrame(this);
        getParentFrame().createTitle("");
      }
      
      super.dispose();
    }
  }

  /** displays the GUI as MDI. */
  public final static int GUI_MDI = 0;
  /** displays the GUI as SDI. */
  public final static int GUI_SDI = 1;
  /** GUI tags. */
  public static final Tag[] TAGS_GUI = {
    new Tag(GUI_MDI, "MDI", "MDI Layout"),
    new Tag(GUI_SDI, "SDI", "SDI Layout")
  };
  
  /** the frame itself. */
  protected Main m_Self;
  
  /** the type of GUI to display. */
  protected int m_GUIType = GUI_MDI;
  
  /** variable for the Main class which would be set to null by the memory
   *  monitoring thread to free up some memory if we running out of memory. */
  protected static Main m_MainCommandline;
  
  /** singleton instance of the GUI. */
  protected static Main m_MainSingleton;

  /** list of things to be notified when the startup process of
   *  the KnowledgeFlow is complete. */
  protected static Vector m_StartupListeners = new Vector();

  /** for monitoring the Memory consumption. */
  protected static Memory m_Memory = new Memory(true);
  
  /** contains the child frames (title &lt;-&gt; object). */
  protected HashSet<Container> m_ChildFrames = new HashSet<Container>();

  /** The frame of the LogWindow. */
  protected static LogWindow m_LogWindow = new LogWindow();

  /** filechooser for the TreeVisualizer. */
  protected JFileChooser m_FileChooserTreeVisualizer = new JFileChooser(new File(System.getProperty("user.dir")));

  /** filechooser for the GraphVisualizer. */
  protected JFileChooser m_FileChooserGraphVisualizer = new JFileChooser(new File(System.getProperty("user.dir")));

  /** filechooser for Plots. */
  protected JFileChooser m_FileChooserPlot = new JFileChooser(new File(System.getProperty("user.dir")));

  /** filechooser for ROC curves. */
  protected JFileChooser m_FileChooserROC = new JFileChooser(new File(System.getProperty("user.dir")));
  
  // GUI components
  private JMenu jMenuHelp;
  private JMenu jMenuVisualization;
  private JMenu jMenuTools;
  private JDesktopPane jDesktopPane;
  private JMenu jMenuApplications;
  private JMenuItem jMenuItemHelpSystemInfo;
  private JMenuItem jMenuItemHelpAbout;
  private JMenuItem jMenuItemHelpHomepage;
  private JMenuItem jMenuItemHelpWekaWiki;
  private JMenuItem jMenuItemHelpWekaDoc;
  private JMenuItem jMenuItemHelpSourceforge;
  private JMenuItem jMenuItemVisualizationBoundaryVisualizer;
  private JMenuItem jMenuItemVisualizationGraphVisualizer;
  private JMenuItem jMenuItemVisualizationTreeVisualizer;
  private JMenuItem jMenuItemVisualizationROC;
  private JMenuItem jMenuItemVisualizationPlot;
  private JMenuItem jMenuItemToolsEnsembleLibrary;
  private JMenuItem jMenuItemToolsSqlViewer;
  private JMenuItem jMenuItemToolsGroovyConsole;
  private JMenuItem jMenuItemToolsJythonConsole;
  private JMenuItem jMenuItemToolsArffViewer;
  private JMenuItem jMenuItemApplicationsSimpleCLI;
  private JMenuItem jMenuItemApplicationsKnowledgeFlow;
  private JMenuItem jMenuItemApplicationsExperimenter;
  private JMenuItem jMenuItemApplicationsExplorer;
  private JMenuItem jMenuItemProgramExit;
  private JMenuItem jMenuItemProgramLogWindow;
  private JMenuItem jMenuItemProgramMemoryUsage;
  private JMenuItem jMenuItemProgramPreferences;  // TODO: see below
  private JMenu jMenuProgram;
  private JMenu jMenuExtensions;
  private JMenu jMenuWindows;
  private JMenuBar jMenuBar;
  
  /**
   * default constructor.
   */
  public Main() {
    super();
  }
  
  /**
   * creates a frame (depending on m_GUIType) and returns it.
   * 
   * @param parent              the parent of the generated frame
   * @param title               the title of the frame
   * @param c                   the component to place, can be null
   * @param layout              the layout to use, e.g., BorderLayout
   * @param layoutConstraints   the layout constraints, e.g., BorderLayout.CENTER
   * @param width               the width of the frame, ignored if -1
   * @param height              the height of the frame, ignored if -1
   * @param menu                an optional menu
   * @param listener            if true a default listener is added
   * @param visible             if true then the frame is made visible immediately
   * @return                    the generated frame
   * @see                       #m_GUIType
   */
  protected Container createFrame(
      Main parent, String title, Component c, LayoutManager layout, 
      Object layoutConstraints, int width, int height, JMenuBar menu,
      boolean listener, boolean visible) {

    Container result = null;
    
    if (m_GUIType == GUI_MDI) {
      final ChildFrameMDI frame = new ChildFrameMDI(parent, title);
      
      // layout
      frame.setLayout(layout);
      if (c != null)
        frame.getContentPane().add(c, layoutConstraints);
      
      // menu
      frame.setJMenuBar(menu);
      
      // size
      frame.pack();
      if ((width > -1) && (height > -1))
        frame.setSize(width, height);
      frame.validate();

      // listener?
      if (listener) {
        frame.addInternalFrameListener(new InternalFrameAdapter() {
          public void internalFrameClosing(InternalFrameEvent e) {
            frame.dispose();
          }
        });
      }
      
      // display frame
      if (visible) {
        frame.setVisible(true);
        try {
          frame.setSelected(true);
        }
        catch (Exception e) {
          e.printStackTrace();
        }
      }
      
      result = frame;
    }
    else if (m_GUIType == GUI_SDI) {
      final ChildFrameSDI frame = new ChildFrameSDI(parent, title);
      
      // layout
      frame.setLayout(layout);
      if (c != null)
        frame.getContentPane().add(c, layoutConstraints);
      
      // menu
      frame.setJMenuBar(menu);
      
      // size
      frame.pack();
      if ((width > -1) && (height > -1))
        frame.setSize(width, height);
      frame.validate();

      // location
      int screenHeight = getGraphicsConfiguration().getBounds().height;
      int screenWidth  = getGraphicsConfiguration().getBounds().width;
      frame.setLocation(
          (screenWidth - frame.getBounds().width) / 2,
          (screenHeight - frame.getBounds().height) / 2);
      
      // listener?
      if (listener) {
        frame.addWindowListener(new WindowAdapter() {
          public void windowClosing(WindowEvent e) {
            frame.dispose();
          }
        });
      }
      
      // display frame
      if (visible)
        frame.setVisible(true);

      result = frame;
    }
    
    return result;
  }
  
  /**
   * insert the menu item in a sorted fashion.
   * 
   * @param menu        the menu to add the item to
   * @param menuitem    the menu item to add
   */
  protected void insertMenuItem(JMenu menu, JMenuItem menuitem) {
    insertMenuItem(menu, menuitem, 0);
  }
  
  /**
   * insert the menu item in a sorted fashion.
   * 
   * @param menu        the menu to add the item to
   * @param menuitem    the menu item to add
   * @param startIndex  the index in the menu to start with (0-based)
   */
  protected void insertMenuItem(JMenu menu, JMenuItem menuitem, int startIndex) {
    boolean     inserted;
    int         i;
    JMenuItem   current;
    String      currentStr;
    String      newStr;
    
    inserted = false;
    newStr   = menuitem.getText().toLowerCase();
    
    // try to find a spot inbetween
    for (i = startIndex; i < menu.getMenuComponentCount(); i++) {
      if (!(menu.getMenuComponent(i) instanceof JMenuItem))
        continue;
      
      current    = (JMenuItem) menu.getMenuComponent(i);
      currentStr = current.getText().toLowerCase();
      if (currentStr.compareTo(newStr) > 0) {
        inserted = true;
        menu.insert(menuitem, i);
        break;
      }
    }
    
    // add it at the end if not yet inserted
    if (!inserted)
      menu.add(menuitem);
  }
  
  /**
   * initializes the GUI.
   */
  protected void initGUI() {
    m_Self = this;
    
    try {
      // main window
      createTitle("");
      this.setDefaultCloseOperation(WindowConstants.EXIT_ON_CLOSE);
      this.setIconImage(new ImageIcon(getClass().getClassLoader().getResource("weka/gui/weka_icon.gif")).getImage());

      // bits and pieces
      m_FileChooserGraphVisualizer.addChoosableFileFilter(
          new ExtensionFileFilter(".bif", "BIF Files (*.bif)"));
      m_FileChooserGraphVisualizer.addChoosableFileFilter(
          new ExtensionFileFilter(".xml", "XML Files (*.xml)"));

      m_FileChooserPlot.addChoosableFileFilter(
          new ExtensionFileFilter(
              Instances.FILE_EXTENSION,
              "ARFF Files (*" + Instances.FILE_EXTENSION + ")"));
      m_FileChooserPlot.setMultiSelectionEnabled(true);

      m_FileChooserROC.addChoosableFileFilter(
          new ExtensionFileFilter(
              Instances.FILE_EXTENSION,
              "ARFF Files (*" + Instances.FILE_EXTENSION + ")"));

      // Desktop
      if (m_GUIType == GUI_MDI) {
        jDesktopPane = new BackgroundDesktopPane("weka/gui/images/weka_background.gif");
        jDesktopPane.setDragMode(JDesktopPane.OUTLINE_DRAG_MODE);
        setContentPane(jDesktopPane);
      }
      else {
        jDesktopPane = null;
      }

      // Menu
      jMenuBar = new JMenuBar();
      setJMenuBar(jMenuBar);

      // Program
      jMenuProgram = new JMenu();
      jMenuBar.add(jMenuProgram);
      jMenuProgram.setText("Program");
      jMenuProgram.setMnemonic('P');

      // Program/Preferences
      // TODO: read all properties from all props file and display them
      /*
        jMenuItemProgramPreferences = new JMenuItem();
        jMenuProgram.add(jMenuItemProgramPreferences);
        jMenuItemProgramPreferences.setText("Preferences");
        jMenuItemProgramPreferences.setMnemonic('P');
        jMenuItemProgramPreferences.addActionListener(new ActionListener() {
          public void actionPerformed(ActionEvent evt) {
            System.out.println("jMenuItemProgramPreferences.actionPerformed, event="+evt);
            //TODO add your code for jMenuItemProgramPreferences.actionPerformed
          }
        });
       */

      // Program/LogWindow
      jMenuItemProgramLogWindow = new JMenuItem();
      jMenuProgram.add(jMenuItemProgramLogWindow);
      jMenuItemProgramLogWindow.setText("LogWindow");
      jMenuItemProgramLogWindow.setMnemonic('L');
      jMenuItemProgramLogWindow.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          m_LogWindow.setVisible(true);
        }
      });
      
      jMenuItemProgramMemoryUsage = new JMenuItem();
      jMenuProgram.add(jMenuItemProgramMemoryUsage);
      jMenuItemProgramMemoryUsage.setText("Memory usage");
      jMenuItemProgramMemoryUsage.setMnemonic('M');
      jMenuItemProgramMemoryUsage.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemProgramMemoryUsage.getText();
          if (!containsWindow(title)) {
            final MemoryUsagePanel panel = new MemoryUsagePanel();
            Container c = createFrame(
                m_Self, title, panel, new BorderLayout(), 
                BorderLayout.CENTER, 400, 50, null, true, true);
            
            // optimize size
            Dimension size = c.getPreferredSize();
            c.setSize(new Dimension((int) size.getWidth(), (int) size.getHeight()));

            // stop threads
            if (m_GUIType == GUI_MDI) {
              final ChildFrameMDI frame = (ChildFrameMDI) c;
              Point l = panel.getFrameLocation();
              if ((l.x != -1) && (l.y != -1))
                frame.setLocation(l);
              frame.addInternalFrameListener(new InternalFrameAdapter() {
                public void internalFrameClosing(InternalFrameEvent e) {
                  panel.stopMonitoring();
                }
              });
            }
            else {
              final ChildFrameSDI frame = (ChildFrameSDI) c;
              Point l = panel.getFrameLocation();
              if ((l.x != -1) && (l.y != -1))
                frame.setLocation(l);
              frame.addWindowListener(new WindowAdapter() {
                public void windowClosing(WindowEvent e) {
                  panel.stopMonitoring();
                }
              });
            }
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      jMenuProgram.add(new JSeparator());

      // Program/Exit
      jMenuItemProgramExit = new JMenuItem();
      jMenuProgram.add(jMenuItemProgramExit);
      jMenuItemProgramExit.setText("Exit");
      jMenuItemProgramExit.setMnemonic('E');
      jMenuItemProgramExit.addActionListener(new ActionListener() {     
        public void actionPerformed(ActionEvent evt) {
          // close all children
          Iterator iter = getWindowList();
          Vector<Container> list = new Vector<Container>();
          while (iter.hasNext())
            list.add((Container) iter.next());
          for (int i = 0; i < list.size(); i++) {
            Container c = list.get(i);
            if (c instanceof ChildFrameMDI)
              ((ChildFrameMDI) c).dispose();
            else if (c instanceof ChildFrameSDI)
              ((ChildFrameSDI) c).dispose();
          }
          // close logwindow
          m_LogWindow.dispose();
          // close main window
          m_Self.dispose();
          // make sure we stop
          System.exit(0);
        }
      });

      // Applications
      jMenuApplications = new JMenu();
      jMenuBar.add(jMenuApplications);
      jMenuApplications.setText("Applications");
      jMenuApplications.setMnemonic('A');

      // Applications/Explorer
      jMenuItemApplicationsExplorer = new JMenuItem();
      jMenuApplications.add(jMenuItemApplicationsExplorer);
      jMenuItemApplicationsExplorer.setText("Explorer");
      jMenuItemApplicationsExplorer.setMnemonic('E');
      jMenuItemApplicationsExplorer.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemApplicationsExplorer.getText();
          if (!containsWindow(title)) {
            createFrame(
                m_Self, title, new Explorer(), new BorderLayout(), 
                BorderLayout.CENTER, 800, 600, null, true, true);
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      // Applications/Experimenter
      jMenuItemApplicationsExperimenter = new JMenuItem();
      jMenuApplications.add(jMenuItemApplicationsExperimenter);
      jMenuItemApplicationsExperimenter.setText("Experimenter");
      jMenuItemApplicationsExperimenter.setMnemonic('X');
      jMenuItemApplicationsExperimenter.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemApplicationsExperimenter.getText();
          if (!containsWindow(title)) {
            createFrame(
                m_Self, title, new Experimenter(false), new BorderLayout(), 
                BorderLayout.CENTER, 800, 600, null, true, true);
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      // Applications/KnowledgeFlow
      jMenuItemApplicationsKnowledgeFlow = new JMenuItem();
      jMenuApplications.add(jMenuItemApplicationsKnowledgeFlow);
      jMenuItemApplicationsKnowledgeFlow.setText("KnowledgeFlow");
      jMenuItemApplicationsKnowledgeFlow.setMnemonic('K');
      jMenuItemApplicationsKnowledgeFlow.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemApplicationsKnowledgeFlow.getText();
          if (!containsWindow(title)) {
            KnowledgeFlowApp.createSingleton(new String[0]);
            createFrame(
                m_Self, title, KnowledgeFlowApp.getSingleton(), new BorderLayout(), 
                BorderLayout.CENTER, 900, 600, null, true, true);
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      // Applications/SimpleCLI
      jMenuItemApplicationsSimpleCLI = new JMenuItem();
      jMenuApplications.add(jMenuItemApplicationsSimpleCLI);
      jMenuItemApplicationsSimpleCLI.setText("SimpleCLI");
      jMenuItemApplicationsSimpleCLI.setMnemonic('S');
      jMenuItemApplicationsSimpleCLI.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemApplicationsSimpleCLI.getText();
          if (!containsWindow(title)) {
            try {
              createFrame(
                  m_Self, title, new SimpleCLIPanel(), new BorderLayout(), 
                  BorderLayout.CENTER, 600, 500, null, true, true);
            }
            catch (Exception e) {
              e.printStackTrace();
              JOptionPane.showMessageDialog(
                  m_Self, "Error instantiating SimpleCLI:\n" + e.getMessage());
              return;
            }
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      // Tools
      jMenuTools = new JMenu();
      jMenuBar.add(jMenuTools);
      jMenuTools.setText("Tools");
      jMenuTools.setMnemonic('T');

      // Tools/ArffViewer
      jMenuItemToolsArffViewer = new JMenuItem();
      jMenuTools.add(jMenuItemToolsArffViewer);
      jMenuItemToolsArffViewer.setText("ArffViewer");
      jMenuItemToolsArffViewer.setMnemonic('A');
      jMenuItemToolsArffViewer.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemToolsArffViewer.getText();
          if (!containsWindow(title)) {
            ArffViewerMainPanel panel = new ArffViewerMainPanel(null);
            panel.setConfirmExit(false);
            Container frame = createFrame(
                m_Self, title, panel, new BorderLayout(), 
                BorderLayout.CENTER, 800, 600, panel.getMenu(), true, true);
            panel.setParent(frame);
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      // Tools/SqlViewer
      jMenuItemToolsSqlViewer = new JMenuItem();
      jMenuTools.add(jMenuItemToolsSqlViewer);
      jMenuItemToolsSqlViewer.setText("SqlViewer");
      jMenuItemToolsSqlViewer.setMnemonic('S');
      jMenuItemToolsSqlViewer.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemToolsSqlViewer.getText();
          if (!containsWindow(title)) {
            final SqlViewer sql = new SqlViewer(null);
            final Container frame = createFrame(
                m_Self, title, sql, new BorderLayout(), 
                BorderLayout.CENTER, -1, -1, null, false, true);

            // custom listener
            if (frame instanceof ChildFrameMDI) {
              ((ChildFrameMDI) frame).addInternalFrameListener(new InternalFrameAdapter() {
                public void internalFrameClosing(InternalFrameEvent e) {
                  sql.saveSize();
                  ((ChildFrameMDI) frame).dispose();
                }
              });
            }
            else if (frame instanceof ChildFrameSDI) {
              ((ChildFrameSDI) frame).addWindowListener(new WindowAdapter() {
                public void windowClosing(WindowEvent e) {
                  sql.saveSize();
                  ((ChildFrameSDI) frame).dispose();
                }
              });
            }
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });
      
      // Tools/Bayes net editor
      // Tools/Bayes net editor
      final JMenuItem jMenuItemBayesNet = new JMenuItem();
      jMenuTools.add(jMenuItemBayesNet);
      jMenuItemBayesNet.setText("Bayes net editor");
      jMenuItemBayesNet.setMnemonic('N');

      jMenuItemBayesNet.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent e) {
          String title = jMenuItemBayesNet.getText();
          
          if (!containsWindow(title)) {
            final GUI bayesNetGUI = new GUI();
            final Container frame = createFrame(
                m_Self, title, bayesNetGUI, new BorderLayout(), 
                BorderLayout.CENTER, 800, 600, bayesNetGUI.getMenuBar(), false, true);
          }
          else {
            showWindow(getWindow(title));
          }          
        }       
      });

      // Tools/Groovy console
      if (Groovy.isPresent()) {
        jMenuItemToolsGroovyConsole = new JMenuItem();
        jMenuTools.add(jMenuItemToolsGroovyConsole);
        jMenuItemToolsGroovyConsole.setText("Groovy console");
        jMenuItemToolsGroovyConsole.setMnemonic('G');
        jMenuItemToolsGroovyConsole.addActionListener(new ActionListener() {
          public void actionPerformed(ActionEvent evt) {
            String title = jMenuItemToolsGroovyConsole.getText();
            if (!containsWindow(title)) {
              final GroovyPanel panel = new GroovyPanel();
              final Container frame = createFrame(
                  m_Self, title, panel, new BorderLayout(), 
                  BorderLayout.CENTER, 800, 600, panel.getMenuBar(), false, true);

              // custom listener
              if (frame instanceof ChildFrameMDI) {
                ((ChildFrameMDI) frame).addInternalFrameListener(new InternalFrameAdapter() {
                  public void internalFrameClosing(InternalFrameEvent e) {
                    ((ChildFrameMDI) frame).dispose();
                  }
                });
              }
              else if (frame instanceof ChildFrameSDI) {
                ((ChildFrameSDI) frame).addWindowListener(new WindowAdapter() {
                  public void windowClosing(WindowEvent e) {
                    ((ChildFrameSDI) frame).dispose();
                  }
                });
              }
            }
            else {
              showWindow(getWindow(title));
            }
          }
        });
      }

      // Tools/Jython console
      if (Jython.isPresent()) {
        jMenuItemToolsJythonConsole = new JMenuItem();
        jMenuTools.add(jMenuItemToolsJythonConsole);
        jMenuItemToolsJythonConsole.setText("Jython console");
        jMenuItemToolsJythonConsole.setMnemonic('J');
        jMenuItemToolsJythonConsole.addActionListener(new ActionListener() {
          public void actionPerformed(ActionEvent evt) {
            String title = jMenuItemToolsJythonConsole.getText();
            if (!containsWindow(title)) {
              final JythonPanel panel = new JythonPanel();
              final Container frame = createFrame(
                  m_Self, title, panel, new BorderLayout(), 
                  BorderLayout.CENTER, 800, 600, panel.getMenuBar(), false, true);

              // custom listener
              if (frame instanceof ChildFrameMDI) {
                ((ChildFrameMDI) frame).addInternalFrameListener(new InternalFrameAdapter() {
                  public void internalFrameClosing(InternalFrameEvent e) {
                    ((ChildFrameMDI) frame).dispose();
                  }
                });
              }
              else if (frame instanceof ChildFrameSDI) {
                ((ChildFrameSDI) frame).addWindowListener(new WindowAdapter() {
                  public void windowClosing(WindowEvent e) {
                    ((ChildFrameSDI) frame).dispose();
                  }
                });
              }
            }
            else {
              showWindow(getWindow(title));
            }
          }
      });
      }

      // Tools/EnsembleLibrary
      /* currently disabled due to bugs... FracPete
      jMenuItemToolsEnsembleLibrary = new JMenuItem();
      jMenuTools.add(jMenuItemToolsEnsembleLibrary);
      jMenuItemToolsEnsembleLibrary.setText("EnsembleLibrary");
      jMenuItemToolsEnsembleLibrary.setMnemonic('E');
      jMenuItemToolsEnsembleLibrary.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemToolsEnsembleLibrary.getText();
          if (!containsWindow(title)) {
            EnsembleLibrary value = new EnsembleLibrary();
            EnsembleLibraryEditor libraryEditor = new EnsembleLibraryEditor();
            libraryEditor.setValue(value);
            createFrame(
                m_Self, title, libraryEditor.getCustomEditor(), new BorderLayout(), 
                BorderLayout.CENTER, 800, 600, null, true, true);
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });
      */

      // Visualization
      jMenuVisualization = new JMenu();
      jMenuBar.add(jMenuVisualization);
      jMenuVisualization.setText("Visualization");
      jMenuVisualization.setMnemonic('V');

      // Visualization/Plot
      jMenuItemVisualizationPlot = new JMenuItem();
      jMenuVisualization.add(jMenuItemVisualizationPlot);
      jMenuItemVisualizationPlot.setText("Plot");
      jMenuItemVisualizationPlot.setMnemonic('P');
      jMenuItemVisualizationPlot.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          // choose file
          int retVal = m_FileChooserPlot.showOpenDialog(m_Self);
          if (retVal != JFileChooser.APPROVE_OPTION)
            return;

          // build plot
          VisualizePanel panel = new VisualizePanel();
          String filenames = "";
          File[] files = m_FileChooserPlot.getSelectedFiles();
          for (int j = 0; j < files.length; j++) {
            String filename = files[j].getAbsolutePath();
            if (j > 0)
              filenames += ", ";
            filenames += filename;
            System.err.println("Loading instances from " + filename);
            try {
              Reader r = new java.io.BufferedReader(new FileReader(filename));
              Instances i = new Instances(r);
              i.setClassIndex(i.numAttributes()-1);
              PlotData2D pd1 = new PlotData2D(i);

              if (j == 0) {
                pd1.setPlotName("Master plot");
                panel.setMasterPlot(pd1);
              } else {
                pd1.setPlotName("Plot "+(j+1));
                pd1.m_useCustomColour = true;
                pd1.m_customColour = (j % 2 == 0) ? Color.red : Color.blue; 
                panel.addPlot(pd1);
              }
            }
            catch (Exception e) {
              e.printStackTrace();
              JOptionPane.showMessageDialog(
                  m_Self, "Error loading file '" + files[j] + "':\n" + e.getMessage());
              return;
            }
          }

          // create frame
          createFrame(
              m_Self, jMenuItemVisualizationPlot.getText() + " - " + filenames, 
              panel, new BorderLayout(), 
              BorderLayout.CENTER, 800, 600, null, true, true);
        }
      });

      // Visualization/ROC
      // based on this Wiki article:
      // http://weka.sourceforge.net/wiki/index.php/Visualizing_ROC_curve
      jMenuItemVisualizationROC = new JMenuItem();
      jMenuVisualization.add(jMenuItemVisualizationROC);
      jMenuItemVisualizationROC.setText("ROC");
      jMenuItemVisualizationROC.setMnemonic('R');
      jMenuItemVisualizationROC.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          // choose file
          int retVal = m_FileChooserROC.showOpenDialog(m_Self);
          if (retVal != JFileChooser.APPROVE_OPTION)
            return;

          // create plot
          String filename  = m_FileChooserROC.getSelectedFile().getAbsolutePath();
          Instances result = null;
          try {
            result = new Instances(new BufferedReader(new FileReader(filename)));
          }
          catch (Exception e) {
            e.printStackTrace();
            JOptionPane.showMessageDialog(
                m_Self, "Error loading file '" + filename + "':\n" + e.getMessage());
            return;
          }
          result.setClassIndex(result.numAttributes() - 1);
          ThresholdVisualizePanel vmc = new ThresholdVisualizePanel();
          vmc.setROCString("(Area under ROC = " + 
              Utils.doubleToString(ThresholdCurve.getROCArea(result), 4) + ")");
          vmc.setName(result.relationName());
          PlotData2D tempd = new PlotData2D(result);
          tempd.setPlotName(result.relationName());
          tempd.addInstanceNumberAttribute();
          try {
            vmc.addPlot(tempd);
          }
          catch (Exception e) {
            e.printStackTrace();
            JOptionPane.showMessageDialog(
                m_Self, "Error adding plot:\n" + e.getMessage());
            return;
          }

          createFrame(
              m_Self, jMenuItemVisualizationROC.getText() + " - " + filename, 
              vmc, new BorderLayout(), 
              BorderLayout.CENTER, 800, 600, null, true, true);
        }
      });

      // Visualization/TreeVisualizer
      jMenuItemVisualizationTreeVisualizer = new JMenuItem();
      jMenuVisualization.add(jMenuItemVisualizationTreeVisualizer);
      jMenuItemVisualizationTreeVisualizer.setText("TreeVisualizer");
      jMenuItemVisualizationTreeVisualizer.setMnemonic('T');
      jMenuItemVisualizationTreeVisualizer.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          // choose file
          int retVal = m_FileChooserTreeVisualizer.showOpenDialog(m_Self);
          if (retVal != JFileChooser.APPROVE_OPTION)
            return;

          // build tree
          String filename = m_FileChooserTreeVisualizer.getSelectedFile().getAbsolutePath();
          TreeBuild builder = new TreeBuild();
          Node top = null;
          NodePlace arrange = new PlaceNode2();
          try {
            top = builder.create(new FileReader(filename));
          }
          catch (Exception e) {
            e.printStackTrace();
            JOptionPane.showMessageDialog(
                m_Self, "Error loading file '" + filename + "':\n" + e.getMessage());
            return;
          }

          // create frame
          createFrame(
              m_Self, jMenuItemVisualizationTreeVisualizer.getText() + " - " + filename, 
              new TreeVisualizer(null, top, arrange), new BorderLayout(), 
              BorderLayout.CENTER, 800, 600, null, true, true);
        }
      });

      // Visualization/GraphVisualizer
      jMenuItemVisualizationGraphVisualizer = new JMenuItem();
      jMenuVisualization.add(jMenuItemVisualizationGraphVisualizer);
      jMenuItemVisualizationGraphVisualizer.setText("GraphVisualizer");
      jMenuItemVisualizationGraphVisualizer.setMnemonic('G');
      jMenuItemVisualizationGraphVisualizer.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          // choose file
          int retVal = m_FileChooserGraphVisualizer.showOpenDialog(m_Self);
          if (retVal != JFileChooser.APPROVE_OPTION)
            return;

          // build graph
          String filename = m_FileChooserGraphVisualizer.getSelectedFile().getAbsolutePath();
          GraphVisualizer panel = new GraphVisualizer();
          try{
            if (    filename.toLowerCase().endsWith(".xml") 
                || filename.toLowerCase().endsWith(".bif") ) {
              panel.readBIF(new FileInputStream(filename));
            }
            else {
              panel.readDOT(new FileReader(filename));
            }
          }
          catch (Exception e) {
            e.printStackTrace();
            JOptionPane.showMessageDialog(
                m_Self, "Error loading file '" + filename + "':\n" + e.getMessage());
            return;
          }

          // create frame
          createFrame(
              m_Self, jMenuItemVisualizationGraphVisualizer.getText() + " - " + filename, 
              panel, new BorderLayout(), 
              BorderLayout.CENTER, 800, 600, null, true, true);
        }
      });

      // Visualization/BoundaryVisualizer
      jMenuItemVisualizationBoundaryVisualizer = new JMenuItem();
      jMenuVisualization.add(jMenuItemVisualizationBoundaryVisualizer);
      jMenuItemVisualizationBoundaryVisualizer.setText("BoundaryVisualizer");
      jMenuItemVisualizationBoundaryVisualizer.setMnemonic('B');
      jMenuItemVisualizationBoundaryVisualizer.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemVisualizationBoundaryVisualizer.getText();
          if (!containsWindow(title)) {
            createFrame(
                m_Self, title, new BoundaryVisualizer(), new BorderLayout(), 
                BorderLayout.CENTER, 800, 600, null, true, true);
            // dont' do a System.exit after last window got closed!
            BoundaryVisualizer.setExitIfNoWindowsOpen(false);
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      // Extensions
      jMenuExtensions = new JMenu("Extensions");
      jMenuExtensions.setMnemonic(java.awt.event.KeyEvent.VK_E);
      jMenuBar.add(jMenuExtensions);
      jMenuExtensions.setVisible(false);

      String extensions = GenericObjectEditor.EDITOR_PROPERTIES.getProperty(
          MainMenuExtension.class.getName(), "");

      if (extensions.length() > 0) {
        jMenuExtensions.setVisible(true);
        String[] classnames = GenericObjectEditor.EDITOR_PROPERTIES.getProperty(
            MainMenuExtension.class.getName(), "").split(",");
        Hashtable<String,JMenu> submenus = new Hashtable<String,JMenu>();

        // add all extensions
        for (int i = 0; i < classnames.length; i++) {
          String classname = classnames[i];
          try {
            MainMenuExtension ext = (MainMenuExtension) Class.forName(classname).newInstance();

            // menuitem in a submenu?
            JMenu submenu = null;
            if (ext.getSubmenuTitle() != null) {
              submenu = submenus.get(ext.getSubmenuTitle());
              if (submenu == null) {
                submenu = new JMenu(ext.getSubmenuTitle());
                submenus.put(ext.getSubmenuTitle(), submenu);
                insertMenuItem(jMenuExtensions, submenu);
              }
            }

            // create menu item
            JMenuItem menuitem = new JMenuItem();
            menuitem.setText(ext.getMenuTitle());
            // does the extension need a frame or does it have its own ActionListener?
            ActionListener listener = ext.getActionListener(m_Self);
            if (listener != null) {
              menuitem.addActionListener(listener);
            }
            else {
              final JMenuItem finalMenuitem = menuitem;
              final MainMenuExtension finalExt = ext;
              menuitem.addActionListener(new ActionListener() {
                public void actionPerformed(ActionEvent e) {
                  Component frame = createFrame(
                      m_Self, finalMenuitem.getText(), 
                      null, null, null, -1, -1, null, false, false);
                  finalExt.fillFrame(frame);
                  frame.setVisible(true);
                }
              });
            }

            // sorted insert of menu item
            if (submenu != null)
              insertMenuItem(submenu, menuitem);
            else
              insertMenuItem(jMenuExtensions, menuitem);
          }
          catch (Exception e) {
            e.printStackTrace();
          }
        }
      }

      // Windows
      jMenuWindows = new JMenu("Windows");
      jMenuWindows.setMnemonic(java.awt.event.KeyEvent.VK_W);
      jMenuBar.add(jMenuWindows);
      jMenuWindows.setVisible(false);  // initially, there are no windows open

      // Help
      jMenuHelp = new JMenu();
      jMenuBar.add(jMenuHelp);
      jMenuHelp.setText("Help");
      jMenuHelp.setMnemonic('H');

      // Help/Homepage
      jMenuItemHelpHomepage = new JMenuItem();
      jMenuHelp.add(jMenuItemHelpHomepage);
      jMenuItemHelpHomepage.setText("Weka homepage");
      jMenuItemHelpHomepage.setMnemonic('H');
      jMenuItemHelpHomepage.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          BrowserHelper.openURL(m_Self, "http://www.cs.waikato.ac.nz/~ml/weka/");
        }
      });

      jMenuHelp.add(new JSeparator());

/*      // Help/WekaDoc
      jMenuItemHelpWekaDoc = new JMenuItem();
      jMenuHelp.add(jMenuItemHelpWekaDoc);
      jMenuItemHelpWekaDoc.setText("Online documentation");
      jMenuItemHelpWekaDoc.setMnemonic('D');
      jMenuItemHelpWekaDoc.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          BrowserHelper.openURL(m_Self, "http://weka.sourceforge.net/wekadoc/");
        }
      }); */

      // Help/WekaWiki
      jMenuItemHelpWekaWiki = new JMenuItem();
      jMenuHelp.add(jMenuItemHelpWekaWiki);
      jMenuItemHelpWekaWiki.setText("HOWTOs, code snippets, etc.");
      jMenuItemHelpWekaWiki.setMnemonic('W');
      jMenuItemHelpWekaWiki.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          BrowserHelper.openURL(m_Self, "http://weka.wikispaces.com/");
        }
      });

      // Help/Sourceforge
      jMenuItemHelpSourceforge = new JMenuItem();
      jMenuHelp.add(jMenuItemHelpSourceforge);
      jMenuItemHelpSourceforge.setText("Weka on SourceForge");
      jMenuItemHelpSourceforge.setMnemonic('F');
      jMenuItemHelpSourceforge.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          BrowserHelper.openURL(m_Self, "http://sourceforge.net/projects/weka/");
        }
      });

      jMenuHelp.add(new JSeparator());

      // Help/SystemInfo
      jMenuItemHelpSystemInfo = new JMenuItem();
      jMenuHelp.add(jMenuItemHelpSystemInfo);
      jMenuItemHelpSystemInfo.setText("SystemInfo");
      jMenuItemHelpHomepage.setMnemonic('S');
      jMenuItemHelpSystemInfo.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemHelpSystemInfo.getText();
          if (!containsWindow(title)) {
            // get info
            Hashtable info = new SystemInfo().getSystemInfo();

            // sort names
            Vector names = new Vector();
            Enumeration enm = info.keys();
            while (enm.hasMoreElements())
              names.add(enm.nextElement());
            Collections.sort(names);

            // generate table
            String[][] data = new String[info.size()][2];
            for (int i = 0; i < names.size(); i++) {
              data[i][0] = names.get(i).toString();
              data[i][1] = info.get(data[i][0]).toString();
            }
            String[] titles = new String[]{"Key", "Value"};
            JTable table = new JTable(data, titles);

            createFrame(
                m_Self, title, new JScrollPane(table), new BorderLayout(), 
                BorderLayout.CENTER, 800, 600, null, true, true);
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      jMenuHelp.add(new JSeparator());

      // Help/About
      jMenuItemHelpAbout = new JMenuItem();
      jMenuHelp.add(jMenuItemHelpAbout);
      jMenuItemHelpAbout.setText("About");
      jMenuItemHelpAbout.setMnemonic('A');
      jMenuItemHelpAbout.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          String title = jMenuItemHelpAbout.getText();
          if (!containsWindow(title)) {
            JPanel wekaPan = new JPanel();
            wekaPan.setToolTipText("Weka, a native bird of New Zealand");
            ImageIcon wii = new ImageIcon(Toolkit.getDefaultToolkit().getImage(ClassLoader.getSystemResource("weka/gui/weka3.gif")));
            JLabel wekaLab = new JLabel(wii);
            wekaPan.add(wekaLab);
            Container frame = createFrame(
                m_Self, title, wekaPan, new BorderLayout(), 
                BorderLayout.CENTER, -1, -1, null, true, true);

            JPanel titlePan = new JPanel();
            titlePan.setLayout(new GridLayout(8,1));
            titlePan.setBorder(BorderFactory.createEmptyBorder(10, 5, 10, 5));
            titlePan.add(new JLabel("Waikato Environment for", SwingConstants.CENTER));
            titlePan.add(new JLabel("Knowledge Analysis", SwingConstants.CENTER));
            titlePan.add(new JLabel(""));
            titlePan.add(new JLabel("Version " + Version.VERSION, SwingConstants.CENTER));
            titlePan.add(new JLabel(""));
            titlePan.add(new JLabel("(c) " + Copyright.getFromYear() + " - " + Copyright.getToYear(), SwingConstants.CENTER));
            titlePan.add(new JLabel(Copyright.getOwner(), SwingConstants.CENTER));
            titlePan.add(new JLabel(Copyright.getAddress(), SwingConstants.CENTER));

            if (frame instanceof ChildFrameMDI) {
              ((ChildFrameMDI) frame).getContentPane().add(titlePan, BorderLayout.NORTH);
              ((ChildFrameMDI) frame).pack();
            }
            else if (frame instanceof ChildFrameSDI) {
              ((ChildFrameSDI) frame).getContentPane().add(titlePan, BorderLayout.NORTH);
              ((ChildFrameSDI) frame).pack();
            }
          }
          else {
            showWindow(getWindow(title));
          }
        }
      });

      // size + position
      int screenHeight = getGraphicsConfiguration().getBounds().height;
      int screenWidth  = getGraphicsConfiguration().getBounds().width;
      if (m_GUIType == GUI_MDI) {
        int newHeight = (int) (((double) screenHeight) * 0.75);
        int newWidth  = (int) (((double) screenWidth)  * 0.75);
        setSize(
            1000 > newWidth  ? newWidth  : 1000,
                800  > newHeight ? newHeight : 800);
        setLocation(
            (screenWidth - getBounds().width) / 2,
            (screenHeight - getBounds().height) / 2);
      }
      else if (m_GUIType == GUI_SDI) {
        pack();
        setSize(screenWidth, getHeight());
        setLocation(0, 0);
      }
    } 
    catch (Exception e) {
      e.printStackTrace();
    }
  }
  
  /**
   * creates and displays the title.
   * 
   * @param title       the additional part of the title
   */
  protected void createTitle(String title) {
    String      newTitle;
    
    newTitle = "Weka " + new Version();
    if (title.length() != 0)
      newTitle += " - " + title;
    
    setTitle(newTitle);
  }
  
  /**
   * adds the given child frame to the list of frames.
   * 
   * @param c           the child frame to add
   */
  public void addChildFrame(Container c) {
    m_ChildFrames.add(c);
    windowListChanged();
  }
  
  /**
   * tries to remove the child frame, it returns true if it could do such.
   * 
   * @param c           the child frame to remove
   * @return            true if the child frame could be removed
   */
  public boolean removeChildFrame(Container c) {
    boolean result = m_ChildFrames.remove(c);
    windowListChanged();
    return result;
  }
  
  /**
   * brings child frame to the top.
   * 
   * @param c           the frame to activate
   * @return            true if frame was activated
   */
  public boolean showWindow(Container c) {
    boolean             result;
    ChildFrameMDI       mdiFrame;
    ChildFrameSDI       sdiFrame;
    
    if (c != null) {
      try {
        if (c instanceof ChildFrameMDI) {
          mdiFrame = (ChildFrameMDI) c;
          mdiFrame.setIcon(false);
          mdiFrame.toFront();
          createTitle(mdiFrame.getTitle());
        }
        else if (c instanceof ChildFrameSDI) {
          sdiFrame = (ChildFrameSDI) c;
          sdiFrame.setExtendedState(JFrame.NORMAL);
          sdiFrame.toFront();
          createTitle(sdiFrame.getTitle());
        }
      }
      catch (Exception e) {
        e.printStackTrace();
      }
      result = true;
    }
    else {
      result = false;
    }
    
    return result;
  }
  
  /**
   * brings the first frame to the top that is of the specified
   * window class.
   *  
   * @param windowClass the class to display the first child for
   * @return            true, if a child was found and brought to front
   */
  public boolean showWindow(Class windowClass) {
    return showWindow(getWindow(windowClass));
  }
  
  /**
   * returns all currently open frames.
   * 
   * @return            an iterator over all currently open frame
   */
  public Iterator getWindowList() {
    return m_ChildFrames.iterator();
  }

  /**
   * returns the first instance of the given window class, null if none can be 
   * found.
   * 
   * @param windowClass the class to retrieve the first instance for
   * @return            null, if no instance can be found
   */
  public Container getWindow(Class windowClass) {
    Container   result;
    Iterator    iter;
    Container   current;
    
    result = null;
    iter   = getWindowList();
    while (iter.hasNext()) {
      current = (Container) iter.next();
      if (current.getClass() == windowClass) {
        result = current;
        break;
      }
    }
    
    return result;
  }

  /**
   * returns the first window with the given title, null if none can be 
   * found.
   * 
   * @param title       the title to look for
   * @return            null, if no instance can be found
   */
  public Container getWindow(String title) {
    Container   result;
    Iterator    iter;
    Container   current;
    boolean     found;
    
    result = null;
    iter   = getWindowList();
    while (iter.hasNext()) {
      current = (Container) iter.next();
      found   = false;
      
      if (current instanceof ChildFrameMDI)
        found = ((ChildFrameMDI) current).getTitle().equals(title);
      else if (current instanceof ChildFrameSDI)
        found = ((ChildFrameSDI) current).getTitle().equals(title);
        
      if (found) {
        result = current;
        break;
      }
    }
    
    return result;
  }
  
  /**
   * checks, whether an instance of the given window class is already in
   * the Window list.
   * 
   * @param windowClass the class to check for an instance in the current
   *                    window list
   * @return            true if the class is already listed in the Window list
   */
  public boolean containsWindow(Class windowClass) {
    return (getWindow(windowClass) != null);
  }
  
  /**
   * checks, whether a window with the given title is already in
   * the Window list.
   * 
   * @param title       the title to check for in the current window list
   * @return            true if a window with the given title is already 
   *                    listed in the Window list
   */
  public boolean containsWindow(String title) {
    return (getWindow(title) != null);
  }
  
  /**
   * minimizes all windows.
   */
  public void minimizeWindows() {
    Iterator    iter;
    Container   frame;
    
    iter = getWindowList();
    while (iter.hasNext()) {
      frame = (Container) iter.next();
      try {
        if (frame instanceof ChildFrameMDI)
          ((ChildFrameMDI) frame).setIcon(true);
        else if (frame instanceof ChildFrameSDI)
          ((ChildFrameSDI) frame).setExtendedState(JFrame.ICONIFIED);
      }
      catch (Exception e) {
        e.printStackTrace();
      }
    }
  }
  
  /**
   * restores all windows.
   */
  public void restoreWindows() {
    Iterator    iter;
    Container   frame;
    
    iter = getWindowList();
    while (iter.hasNext()) {
      frame = (Container) iter.next();
      try {
        if (frame instanceof ChildFrameMDI)
          ((ChildFrameMDI) frame).setIcon(false);
        else if (frame instanceof ChildFrameSDI)
          ((ChildFrameSDI) frame).setExtendedState(JFrame.NORMAL);
    }
      catch (Exception e) {
        e.printStackTrace();
      }
    }
  }
  
  /**
   * is called when window list changed somehow (add or remove).
   */
  public void windowListChanged() {
    createWindowMenu();
  }
  
  /**
   * creates the menu of currently open windows.
   */
  protected synchronized void createWindowMenu() {
    Iterator          iter;
    JMenuItem         menuItem;
    int               startIndex;
    
    // remove all existing entries
    jMenuWindows.removeAll();
    
    // minimize + restore + separator
    menuItem = new JMenuItem("Minimize");
    menuItem.addActionListener(new ActionListener() {
      public void actionPerformed(ActionEvent evt) {
        minimizeWindows();
      }
    });
    jMenuWindows.add(menuItem);
    
    menuItem = new JMenuItem("Restore");
    menuItem.addActionListener(new ActionListener() {
      public void actionPerformed(ActionEvent evt) {
        restoreWindows();
      }
    });
    jMenuWindows.add(menuItem);
    
    jMenuWindows.addSeparator();
    
    // windows
    startIndex = jMenuWindows.getMenuComponentCount() - 1;
    iter = getWindowList();
    jMenuWindows.setVisible(iter.hasNext());
    while (iter.hasNext()) {
      Container frame = (Container) iter.next();
      if (frame instanceof ChildFrameMDI)
        menuItem = new JMenuItem(((ChildFrameMDI) frame).getTitle());
      else if (frame instanceof ChildFrameSDI)
        menuItem = new JMenuItem(((ChildFrameSDI) frame).getTitle());
      insertMenuItem(jMenuWindows, menuItem, startIndex);
      menuItem.setActionCommand(Integer.toString(frame.hashCode()));
      menuItem.addActionListener(new ActionListener() {
        public void actionPerformed(ActionEvent evt) {
          Container frame = null;
          Iterator iter = getWindowList();
          while (iter.hasNext()) {
            frame = (Container) iter.next();
            String hashFrame = Integer.toString(frame.hashCode());
            if (hashFrame.equals(evt.getActionCommand())) {
              showWindow(frame);
              break;
            }
          }
          showWindow(frame);
        }
      });
    }
  }
  
  /**
   * Shows or hides this component depending on the value of parameter b.
   * 
   * @param b           if true, shows this component; otherwise, hides this 
   *                    component
   */
  public void setVisible(boolean b) {
    super.setVisible(b);
    
    if (b)
      paint(this.getGraphics());
  }
  
  /**
   * Create the singleton instance of the Main GUI.
   * 
   * @param args        commandline options
   */
  public static void createSingleton(String[] args) {
    if (m_MainSingleton == null)
      m_MainSingleton = new Main();
    
    // set options
    try {
      m_MainSingleton.setOptions(args);
    }
    catch (Exception e) {
      e.printStackTrace();
    }

    // notify listeners (if any)
    for (int i = 0; i < m_StartupListeners.size(); i++)
      ((StartUpListener) m_StartupListeners.elementAt(i)).startUpComplete();
  }

  /**
   * Return the singleton instance of the Main GUI.
   *
   * @return the singleton instance
   */
  public static Main getSingleton() {
    return m_MainSingleton;
  }

  /**
   * Add a listener to be notified when startup is complete.
   * 
   * @param s           a listener to add
   */
  public static void addStartupListener(StartUpListener s) {
    m_StartupListeners.add(s);
  }

  /**
   * Gets an enumeration describing the available options.
   *
   * @return            an enumeration of all the available options.
   */
  public Enumeration listOptions(){
    Vector              result;
    String              desc;
    SelectedTag         tag;
    int                 i;

    result = new Vector();

    desc  = "";
    for (i = 0; i < TAGS_GUI.length; i++) {
      tag = new SelectedTag(TAGS_GUI[i].getID(), TAGS_GUI);
      desc  +=   "\t" + tag.getSelectedTag().getIDStr() 
               + " = " + tag.getSelectedTag().getReadable()
               + "\n";
    }
    result.addElement(new Option(
        "\tDetermines the layout of the GUI:\n"
        + desc
        + "\t(default: " + new SelectedTag(GUI_MDI, TAGS_GUI) + ")",
        "gui", 1, "-gui " + Tag.toOptionList(TAGS_GUI)));

    return result.elements();
  }
  
  /**
   * returns the options of the current setup.
   *
   * @return            the current options
   */
  public String[] getOptions(){
    Vector<String>      result;

    result = new Vector();

    result.add("-gui");
    result.add("" + getGUIType());

    return result.toArray(new String[result.size()]);     
  }

  /**
   * Parses the options for this object. <p/>
   *
   <!-- options-start -->
   * Valid options are: <p/>
   * 
   * <pre> -gui &lt;MDI|SDI&gt;
   *  Determines the layout of the GUI:
   *  MDI = MDI Layout
   *  SDI = SDI Layout
   *  (default: MDI)</pre>
   * 
   <!-- options-end -->
   *
   * @param options     the options to use
   * @throws Exception  if setting of options fails
   */
  public void setOptions(String[] options) throws Exception {
    String      tmpStr;

    tmpStr = Utils.getOption("gui", options);
    if (tmpStr.length() != 0)
      setGUIType(new SelectedTag(tmpStr, TAGS_GUI));
    else
      setGUIType(new SelectedTag(GUI_MDI, TAGS_GUI));
  }

  /**
   * Sets the type of GUI to use. 
   *
   * @param value       .the GUI type
   */
  public void setGUIType(SelectedTag value) {
    if (value.getTags() == TAGS_GUI) {
      m_GUIType = value.getSelectedTag().getID();
      initGUI();
    }
  }

  /**
   * Gets the currently set type of GUI to display. 
   * 
   * @return            the current GUI Type.
   */
  public SelectedTag getGUIType() {
    return new SelectedTag(m_GUIType, TAGS_GUI);
  }
  
  /**
   * starts the application.
   * 
   * @param args        the commandline arguments - ignored
   */
  public static void main(String[] args) {
    weka.core.logging.Logger.log(weka.core.logging.Logger.Level.INFO, "Logging started");
    
    LookAndFeel.setLookAndFeel();
    
    try {
      // uncomment the following line to disable the memory management:
      //m_Memory.setEnabled(false);

      // help?
      if (Utils.getFlag('h', args)) {
        System.out.println();
        System.out.println("Help requested.");
        System.out.println();
        System.out.println("General options:");
        System.out.println();
        System.out.println("-h");
        System.out.println("\tprints this help screen");
        System.out.println();

        Enumeration enu = new Main().listOptions();
        while (enu.hasMoreElements()) {
          Option option = (Option) enu.nextElement();
          System.out.println(option.synopsis());
          System.out.println(option.description());
        }

        System.out.println();
        System.exit(0);
      }
      
      // setup splash screen
      Main.addStartupListener(new weka.gui.beans.StartUpListener() {
        public void startUpComplete() {
          m_MainCommandline = Main.getSingleton();
          m_MainCommandline.setVisible(true);
        }
      });
      Main.addStartupListener(new StartUpListener() {
        public void startUpComplete() {
          SplashWindow.disposeSplash();
        }
      });
      SplashWindow.splash(ClassLoader.getSystemResource("weka/gui/images/weka_splash.gif"));

      // start GUI
      final String[] options = (String[]) args.clone();
      Thread nt = new Thread() {
        public void run() {
          weka.gui.SplashWindow.invokeMethod(
              Main.class.getName(), "createSingleton", options);
        }
      };
      nt.start();
      
      Thread memMonitor = new Thread() {
        public void run() {
          while(true) {
            try {
              Thread.sleep(4000);
              System.gc();
              
              if (m_Memory.isOutOfMemory()) {
                // clean up
                m_MainCommandline = null;
                System.gc();
                
                // stop threads
                m_Memory.stopThreads();
                
                // display error
                System.err.println("\ndisplayed message:");
                m_Memory.showOutOfMemory();
                System.err.println("\nexiting");
                System.exit(-1);
              }
              
            } catch(InterruptedException ex) { ex.printStackTrace(); }
          }
        }
      };
      
      memMonitor.setPriority(Thread.MAX_PRIORITY);
      memMonitor.start();
    }
    catch (Exception ex) {
      ex.printStackTrace();
      System.err.println(ex.getMessage());
    }
  }
}