1 | /* |
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2 | * STANDARD ML OF NEW JERSEY COPYRIGHT NOTICE, LICENSE AND DISCLAIMER. |
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3 | * |
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4 | * Copyright (c) 1989-1998 by Lucent Technologies |
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5 | * |
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6 | * Permission to use, copy, modify, and distribute this software and its |
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7 | * documentation for any purpose and without fee is hereby granted, provided |
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8 | * that the above copyright notice appear in all copies and that both the |
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9 | * copyright notice and this permission notice and warranty disclaimer appear |
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10 | * in supporting documentation, and that the name of Lucent Technologies, Bell |
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11 | * Labs or any Lucent entity not be used in advertising or publicity pertaining |
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12 | * to distribution of the software without specific, written prior permission. |
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13 | * |
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14 | * Lucent disclaims all warranties with regard to this software, including all |
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15 | * implied warranties of merchantability and fitness. In no event shall Lucent |
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16 | * be liable for any special, indirect or consequential damages or any damages |
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17 | * whatsoever resulting from loss of use, data or profits, whether in an action |
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18 | * of contract, negligence or other tortious action, arising out of or in |
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19 | * connection with the use or performance of this software. |
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20 | * |
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21 | * Taken from this URL: |
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22 | * http://www.smlnj.org/license.html |
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23 | * |
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24 | * This license is compatible with the GNU GPL (see section "Standard ML of New |
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25 | * Jersey Copyright License"): |
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26 | * http://www.gnu.org/licenses/license-list.html#StandardMLofNJ |
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27 | */ |
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28 | |
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29 | /* |
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30 | * Copyright 1996-1999 by Scott Hudson, Frank Flannery, C. Scott Ananian |
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31 | */ |
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32 | |
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33 | package weka.filters.unsupervised.instance.subsetbyexpression; |
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34 | |
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35 | import weka.core.*; |
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36 | import java_cup.runtime.*; |
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37 | |
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38 | import java.io.*; |
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39 | import java.util.*; |
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40 | |
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41 | /** |
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42 | * A parser for evaluating whether an Instance complies to a boolean expression |
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43 | * or not. |
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44 | * |
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45 | * @author FracPete (fracpete at waikato dot ac dot nz) |
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46 | * @version $Revision: 4939 $ |
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47 | */ |
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48 | |
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49 | parser code {: |
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50 | /** variable - value relation. */ |
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51 | protected HashMap m_Symbols = new HashMap(); |
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52 | |
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53 | /** attribute - attribute-type (constants from weka.core.Attribute) relation. */ |
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54 | protected Hashtable<String,Integer> m_AttributeTypes = new Hashtable<String,Integer>(); |
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55 | |
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56 | /** for storing the result of the expression. */ |
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57 | protected Boolean m_Result = null; |
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58 | |
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59 | /** |
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60 | * Sets the variable - value relation to use. |
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61 | * |
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62 | * @param value the variable-value relation |
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63 | */ |
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64 | public void setSymbols(HashMap value) { |
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65 | m_Symbols = value; |
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66 | } |
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67 | |
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68 | /** |
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69 | * Returns the current variable - value relation in use. |
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70 | * |
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71 | * @return the variable-value relation |
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72 | */ |
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73 | public HashMap getSymbols() { |
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74 | return m_Symbols; |
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75 | } |
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76 | |
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77 | /** |
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78 | * Sets the attribute - attribute-type relation to use. |
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79 | * |
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80 | * @param value the att - att-type relation |
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81 | */ |
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82 | public void setAttributeTypes(Hashtable value) { |
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83 | m_AttributeTypes = value; |
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84 | } |
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85 | |
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86 | /** |
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87 | * Returns the current attribute - attribute-type relation in use. |
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88 | * |
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89 | * @return the att - att-type relation |
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90 | */ |
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91 | public Hashtable getAttributeTypes() { |
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92 | return m_AttributeTypes; |
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93 | } |
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94 | |
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95 | /** |
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96 | * Sets the result of the evaluation. |
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97 | * |
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98 | * @param value the result |
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99 | */ |
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100 | public void setResult(Boolean value) { |
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101 | m_Result = value; |
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102 | } |
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103 | |
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104 | /** |
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105 | * Returns the result of the evaluation. |
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106 | * |
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107 | * @return the result |
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108 | */ |
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109 | public Boolean getResult() { |
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110 | return m_Result; |
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111 | } |
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112 | |
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113 | /** |
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114 | * Returns either a String object for nominal attributes or a Double for numeric |
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115 | * ones. For all other attribute types this method throws an Exception. |
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116 | * It also returns a Double object in case of a missing value (for all |
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117 | * attribute types!). |
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118 | * |
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119 | * @param instance the instance to work on |
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120 | * @param index the index of the attribute to return |
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121 | * @return the converted value |
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122 | */ |
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123 | public static Object getValue(Instance instance, int index) { |
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124 | if (instance.isMissing(index)) |
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125 | return new Double(Instance.missingValue()); |
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126 | else if (instance.attribute(index).isNominal()) |
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127 | return new String(instance.stringValue(index)); |
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128 | else if (instance.attribute(index).isNumeric()) |
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129 | return new Double(instance.value(index)); |
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130 | else |
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131 | throw new IllegalArgumentException( |
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132 | "Unhandled attribute type '" + instance.attribute(index).type() + "'!"); |
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133 | } |
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134 | |
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135 | /** |
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136 | * Filters the input dataset against the provided expression. |
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137 | * |
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138 | * @param expression the expression used for filtering |
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139 | * @param input the input data |
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140 | * @return the filtered data |
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141 | * @throws Exception if parsing fails |
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142 | */ |
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143 | public static Instances filter(String expression, Instances input) throws Exception { |
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144 | // setup output |
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145 | Instances output = new Instances(input, 0); |
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146 | |
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147 | // setup attribute - attribute-type relation |
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148 | Hashtable<String,Integer> attTypes = new Hashtable<String,Integer>(); |
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149 | for (int i = 0; i < input.numAttributes(); i++) |
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150 | attTypes.put("ATT" + (i+1), input.attribute(i).type()); |
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151 | if (input.classIndex() > -1) |
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152 | attTypes.put("CLASS", input.classAttribute().type()); |
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153 | |
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154 | // filter dataset |
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155 | SymbolFactory sf = new DefaultSymbolFactory(); |
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156 | HashMap symbols = new HashMap(); |
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157 | ByteArrayInputStream parserInput = new ByteArrayInputStream(expression.getBytes()); |
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158 | for (int i = 0; i < input.numInstances(); i++) { |
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159 | Instance instance = input.instance(i); |
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160 | |
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161 | // setup symbols |
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162 | for (int n = 0; n < instance.numAttributes(); n++) { |
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163 | if (n == instance.classIndex()) |
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164 | symbols.put("CLASS", getValue(instance, n)); |
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165 | symbols.put("ATT" + (n+1), getValue(instance, n)); |
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166 | } |
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167 | |
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168 | // evaluate expression |
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169 | parserInput.reset(); |
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170 | Parser parser = new Parser(new Scanner(parserInput,sf), sf); |
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171 | parser.setSymbols(symbols); |
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172 | parser.parse(); |
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173 | if (parser.getResult()) |
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174 | output.add((Instance) instance.copy()); |
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175 | } |
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176 | |
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177 | return output; |
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178 | } |
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179 | |
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180 | /** |
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181 | * Runs the parser from commandline. Takes the following arguments: |
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182 | * <ol> |
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183 | * <li>expression</li> |
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184 | * <li>input file</li> |
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185 | * <li>class index (first|last|num), use 0 to ignore</li> |
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186 | * <li>output file</li> |
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187 | * </ol> |
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188 | * |
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189 | * @param args the commandline arguments |
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190 | * @throws Exception if something goes wrong |
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191 | */ |
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192 | public static void main(String args[]) throws Exception { |
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193 | // get expression |
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194 | String expression = args[0]; |
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195 | |
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196 | // read input data |
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197 | BufferedReader reader = new BufferedReader(new FileReader(args[1])); |
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198 | Instances input = new Instances(reader); |
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199 | reader.close(); |
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200 | if (args[2].equals("first")) |
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201 | input.setClassIndex(0); |
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202 | else if (args[2].equals("last")) |
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203 | input.setClassIndex(input.numAttributes() - 1); |
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204 | else |
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205 | input.setClassIndex(Integer.parseInt(args[2]) - 1); |
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206 | |
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207 | // process dataset |
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208 | Instances output = filter(expression, input); |
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209 | |
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210 | // save output file |
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211 | BufferedWriter writer = new BufferedWriter(new FileWriter(args[3])); |
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212 | writer.write(new Instances(output, 0).toString()); |
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213 | writer.newLine(); |
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214 | for (int i = 0; i < output.numInstances(); i++) { |
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215 | writer.write(output.instance(i).toString()); |
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216 | writer.newLine(); |
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217 | } |
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218 | writer.flush(); |
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219 | writer.close(); |
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220 | } |
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221 | :} |
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222 | |
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223 | terminal COMMA, LPAREN, RPAREN, ISMISSING; |
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224 | terminal MINUS, PLUS, TIMES, DIVISION; |
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225 | terminal ABS, SQRT, LOG, EXP, SIN, COS, TAN, RINT, FLOOR, POW, CEIL; |
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226 | terminal TRUE, FALSE, LT, LE, GT, GE, EQ, NOT, AND, OR, IS; |
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227 | terminal Double NUMBER; |
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228 | terminal Boolean BOOLEAN; |
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229 | terminal String ATTRIBUTE, STRING; |
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230 | |
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231 | non terminal boolexpr_list, boolexpr_part; |
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232 | non terminal Double expr; |
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233 | non terminal Double opexpr; |
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234 | non terminal Double funcexpr; |
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235 | non terminal Boolean boolexpr; |
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236 | |
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237 | precedence left PLUS, MINUS; |
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238 | precedence left TIMES, DIVISION; |
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239 | precedence left LPAREN, RPAREN; |
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240 | precedence left ABS, SQRT, LOG, EXP, SIN, COS, TAN, RINT, FLOOR, POW, CEIL; |
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241 | precedence left AND, OR; |
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242 | precedence left NOT; |
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243 | |
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244 | boolexpr_list ::= boolexpr_list boolexpr_part | boolexpr_part; |
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245 | boolexpr_part ::= boolexpr:e {: parser.setResult(e); :} ; |
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246 | boolexpr ::= BOOLEAN:b |
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247 | {: RESULT = b; :} |
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248 | | TRUE |
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249 | {: RESULT = new Boolean(true); :} |
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250 | | FALSE |
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251 | {: RESULT = new Boolean(false); :} |
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252 | | expr:l LT expr:r |
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253 | {: RESULT = new Boolean(l.doubleValue() < r.doubleValue()); :} |
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254 | | expr:l LE expr:r |
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255 | {: RESULT = new Boolean(l.doubleValue() <= r.doubleValue()); :} |
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256 | | expr:l GT expr:r |
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257 | {: RESULT = new Boolean(l.doubleValue() > r.doubleValue()); :} |
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258 | | expr:l GE expr:r |
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259 | {: RESULT = new Boolean(l.doubleValue() >= r.doubleValue()); :} |
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260 | | expr:l EQ expr:r |
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261 | {: RESULT = new Boolean(l.doubleValue() == r.doubleValue()); :} |
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262 | | LPAREN boolexpr:b RPAREN |
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263 | {: RESULT = b; :} |
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264 | | NOT boolexpr:b |
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265 | {: RESULT = !b; :} |
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266 | | boolexpr:l AND boolexpr:r |
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267 | {: RESULT = l && r; :} |
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268 | | boolexpr:l OR boolexpr:r |
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269 | {: RESULT = l || r; :} |
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270 | | ATTRIBUTE:a IS STRING:s |
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271 | {: if (parser.getSymbols().containsKey(a)) |
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272 | RESULT = (parser.getSymbols().get(a) instanceof String) && ((String) parser.getSymbols().get(a)).equals(s); |
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273 | else |
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274 | throw new IllegalStateException("Unknown symbol '" + a + "'!"); |
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275 | :} |
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276 | | ISMISSING LPAREN ATTRIBUTE:a RPAREN |
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277 | {: if (parser.getSymbols().containsKey(a)) |
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278 | RESULT = (parser.getSymbols().get(a) instanceof Double) && Instance.isMissingValue((Double) parser.getSymbols().get(a)); |
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279 | else |
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280 | throw new IllegalStateException("Unknown symbol '" + a + "'!"); |
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281 | :} |
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282 | ; |
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283 | |
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284 | expr ::= NUMBER:n |
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285 | {: RESULT = n; :} |
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286 | | ATTRIBUTE:a |
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287 | {: if (parser.getSymbols().containsKey(a)) |
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288 | RESULT = (Double) parser.getSymbols().get(a); |
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289 | else |
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290 | throw new IllegalStateException("Unknown symbol '" + a + "'!"); |
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291 | :} |
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292 | | LPAREN expr:e RPAREN |
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293 | {: RESULT = e; :} |
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294 | | opexpr:o |
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295 | {: RESULT = o; :} |
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296 | | funcexpr:f |
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297 | {: RESULT = f; :} |
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298 | ; |
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299 | |
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300 | opexpr ::= expr:l PLUS expr:r |
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301 | {: RESULT = new Double(l.doubleValue() + r.doubleValue()); :} |
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302 | | expr:l MINUS expr:r |
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303 | {: RESULT = new Double(l.doubleValue() - r.doubleValue()); :} |
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304 | | expr:l TIMES expr:r |
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305 | {: RESULT = new Double(l.doubleValue() * r.doubleValue()); :} |
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306 | | expr:l DIVISION expr:r |
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307 | {: RESULT = new Double(l.doubleValue() / r.doubleValue()); :} |
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308 | ; |
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309 | |
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310 | funcexpr ::= ABS LPAREN expr:e RPAREN |
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311 | {: RESULT = new Double(Math.abs(e)); :} |
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312 | | SQRT LPAREN expr:e RPAREN |
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313 | {: RESULT = new Double(Math.sqrt(e)); :} |
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314 | | LOG LPAREN expr:e RPAREN |
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315 | {: RESULT = new Double(Math.log(e)); :} |
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316 | | EXP LPAREN expr:e RPAREN |
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317 | {: RESULT = new Double(Math.exp(e)); :} |
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318 | | SIN LPAREN expr:e RPAREN |
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319 | {: RESULT = new Double(Math.sin(e)); :} |
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320 | | COS LPAREN expr:e RPAREN |
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321 | {: RESULT = new Double(Math.cos(e)); :} |
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322 | | TAN LPAREN expr:e RPAREN |
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323 | {: RESULT = new Double(Math.tan(e)); :} |
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324 | | RINT LPAREN expr:e RPAREN |
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325 | {: RESULT = new Double(Math.rint(e)); :} |
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326 | | FLOOR LPAREN expr:e RPAREN |
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327 | {: RESULT = new Double(Math.floor(e)); :} |
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328 | | POW LPAREN expr:base COMMA expr:exponent RPAREN |
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329 | {: RESULT = new Double(Math.pow(base, exponent)); :} |
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330 | | CEIL LPAREN expr:e RPAREN |
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331 | {: RESULT = new Double(Math.ceil(e)); :} |
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332 | ; |
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333 | |
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